Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
C [auth U]SCOP2B SuperfamilyTranscription factor IIA (TFIIA), beta-barrel domain 8037002 3001281 SCOP2B (2022-06-29)
C [auth U]SCOP2B SuperfamilyTranscription factor IIA (TFIIA), alpha-helical domain 8037001 3001887 SCOP2B (2022-06-29)
A [auth M]SCOP2B SuperfamilyCyclin-like 8043880 3000768 SCOP2B (2022-06-29)
A [auth M]SCOP2B SuperfamilyCyclin-like 8043882 3000768 SCOP2B (2022-06-29)
B [auth O]SCOP2B SuperfamilyTATA-box binding protein-like 8036293 3000705 SCOP2B (2022-06-29)
B [auth O]SCOP2B SuperfamilyTATA-box binding protein-like 8036295 3000705 SCOP2B (2022-06-29)
D [auth V]SCOP2B SuperfamilyTranscription factor IIA (TFIIA), beta-barrel domain 8037007 3001281 SCOP2B (2022-06-29)
D [auth V]SCOP2B SuperfamilyTranscription factor IIA (TFIIA), alpha-helical domain 8037005 3001887 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
C [auth U]TFIIA_Ce7zwcU2 A: beta duplicates or obligate multimersX: Transcription factor IIA (TFIIA), beta-barrel domain (From Topology)H: Transcription factor IIA (TFIIA), beta-barrel domain (From Topology)T: Transcription factor IIA (TFIIA), beta-barrel domainF: TFIIA_CECOD (1.6)
C [auth U]TFIIA_Ne7zwcU1 A: alpha duplicates or obligate multimersX: TFIIA, alpha-helical domain (From Topology)H: TFIIA, alpha-helical domain (From Topology)T: TFIIA, alpha-helical domainF: TFIIA_NECOD (1.6)
A [auth M]TFIIBe7zwcM1 A: alpha arraysX: HTHH: HTHT: Cyclin-likeF: TFIIBECOD (1.6)
B [auth O]TBPe7zwcO1 A: a+b two layersX: TBP-likeH: TATA-box binding protein-like (From Topology)T: TATA-box binding protein-likeF: TBPECOD (1.6)
D [auth V]TFIIA_gamma_Ce7zwcV1 A: beta duplicates or obligate multimersX: Transcription factor IIA (TFIIA), beta-barrel domain (From Topology)H: Transcription factor IIA (TFIIA), beta-barrel domain (From Topology)T: Transcription factor IIA (TFIIA), beta-barrel domainF: TFIIA_gamma_CECOD (1.6)
D [auth V]TFIIA_gamma_Ne7zwcV2 A: alpha duplicates or obligate multimersX: TFIIA, alpha-helical domain (From Topology)H: TFIIA, alpha-helical domain (From Topology)T: TFIIA, alpha-helical domainF: TFIIA_gamma_NECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C [auth U]PF03153Transcription factor IIA, alpha/beta subunit (TFIIA)Transcription factor IIA, alpha/beta subunit- Family
A [auth M]PF00382Transcription factor TFIIB repeat (TFIIB)Transcription factor TFIIB repeat- Domain
B [auth O]PF00352Transcription factor TFIID (or TATA-binding protein, TBP) (TBP)Transcription factor TFIID (or TATA-binding protein, TBP)- Domain
D [auth V]PF02751Transcription initiation factor IIA, gamma subunit (TFIIA_gamma_C)Transcription initiation factor IIA, gamma subunitAccurate transcription in vivo requires at least six general transcription initiation factors, in addition to RNA polymerase II. Transcription initiation factor IIA (TFIIA) is a multimeric protein which facilitates the binding of TFIID to the TATA b ...Accurate transcription in vivo requires at least six general transcription initiation factors, in addition to RNA polymerase II. Transcription initiation factor IIA (TFIIA) is a multimeric protein which facilitates the binding of TFIID to the TATA box. The C-terminal domain of the gamma subunit is a 12 stranded beta-barrel.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C [auth U]Transcription initiation factor IIA subunit 1
H [auth d]snRNA-activating protein complex subunit 5
A [auth M]Transcription initiation factor IIB
J [auth T]Template strand---
B [auth O]TATA-box-binding protein
D [auth V]Transcription initiation factor IIA subunit 2
E [auth a]snRNA-activating protein complex subunit 1
F [auth b]snRNA-activating protein complex subunit 3
G [auth c]snRNA-activating protein complex subunit 4
I [auth N]Non-template strand---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
C [auth U]IPR004855Transcription factor IIA, alpha/beta subunitFamily
C [auth U]IPR009088Transcription factor IIA, beta-barrelHomologous Superfamily
H [auth d]IPR029138snRNA-activating protein complex subunit 5Family
A [auth M]IPR000812Transcription factor TFIIBFamily
A [auth M]IPR013137Zinc finger, TFIIB-typeDomain
A [auth M]IPR023486Transcription factor TFIIB, conserved siteConserved Site
A [auth M]IPR013150Transcription factor TFIIB, cyclin-like domainDomain
A [auth M]IPR036915Cyclin-like superfamilyHomologous Superfamily
A [auth M]IPR013763Cyclin-like domainDomain
B [auth O]IPR030491TATA-box binding protein, conserved siteConserved Site
B [auth O]IPR000814TATA-box binding proteinFamily
B [auth O]IPR012295TBP domain superfamilyHomologous Superfamily
B [auth O]IPR033710TATA-box binding protein, eukaryoticFamily
D [auth V]IPR015871Transcription initiation factor IIA, gamma subunit, C-terminalDomain
D [auth V]IPR015872Transcription initiation factor IIA, gamma subunit, N-terminalDomain
D [auth V]IPR009083Transcription factor IIA, alpha-helical domainHomologous Superfamily
D [auth V]IPR009088Transcription factor IIA, beta-barrelHomologous Superfamily
D [auth V]IPR003194Transcription initiation factor IIA, gamma subunitFamily
E [auth a]IPR019188snRNA-activating protein complex subunit 1Family
F [auth b]IPR022042snRNA-activating protein complex, subunit 3Family
G [auth c]IPR009057Homedomain-like superfamilyHomologous Superfamily
G [auth c]IPR051575Myb-like DNA-bindingFamily
G [auth c]IPR017930Myb domainDomain
G [auth c]IPR017884SANT domainDomain
G [auth c]IPR001005SANT/Myb domainDomain

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
C [auth U]PharosP52655
H [auth d]PharosO75971
A [auth M]PharosQ00403
B [auth O]PharosP20226
D [auth V]PharosP52657
E [auth a]PharosQ16533
F [auth b]PharosQ92966
G [auth c]PharosQ5SXM2