7ZGP
Polymerase module of CPF in complex with Mpe1 and a pre-cleaved CYC1 RNA
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | F_UNCLASSIFIED | e7zgpB2 | A: few secondary structure elements | X: CCCH zinc finger | H: CCCH zinc finger (From Topology) | T: CCCH zinc finger | F: F_UNCLASSIFIED | ECOD (1.6) |
B | Torus | e7zgpB1 | A: few secondary structure elements | X: CCCH zinc finger | H: CCCH zinc finger (From Topology) | T: CCCH zinc finger | F: Torus | ECOD (1.6) |
C [auth D] | ANAPC4_WD40_9 | e7zgpD1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: ANAPC4_WD40_9 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF03178 | CPSF A subunit region (CPSF_A) | CPSF A subunit region | - | Repeat | |
PF00642 | Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | - | Family | |
C [auth D] | PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR015943 | WD40/YVTN repeat-like-containing domain superfamily | Homologous Superfamily | |
IPR004871 | Cleavage/polyadenylation specificity factor, A subunit, C-terminal | Domain | |
IPR050358 | RSE1/DDB1/CFT1/CPSF1 | Family | |
IPR036855 | Zinc finger, CCCH-type superfamily | Homologous Superfamily | |
IPR000571 | Zinc finger, CCCH-type | Domain | |
IPR045348 | CPSF complex subunit CPSF4-like | Family | |
C [auth D] | IPR045245 | Pre-mRNA 3' end processing protein Pfs2-like | Family |
C [auth D] | IPR001680 | WD40 repeat | Repeat |
C [auth D] | IPR036322 | WD40-repeat-containing domain superfamily | Homologous Superfamily |
C [auth D] | IPR015943 | WD40/YVTN repeat-like-containing domain superfamily | Homologous Superfamily |
E [auth F] | IPR036875 | Zinc finger, CCHC-type superfamily | Homologous Superfamily |
E [auth F] | IPR013083 | Zinc finger, RING/FYVE/PHD-type | Homologous Superfamily |
E [auth F] | IPR014891 | DWNN domain | Domain |
E [auth F] | IPR001878 | Zinc finger, CCHC-type | Domain |