7Z13

S. cerevisiae CMGE dimer nucleating origin DNA melting


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth 2]PF17207e7z1322 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
A [auth 2]PF17855e7z1323 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
A [auth 2]PF14551e7z1321 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
A [auth 2]PF00493e7z1324 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
A [auth 2]F_UNCLASSIFIEDe7z1325 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: F_UNCLASSIFIEDECOD (1.6)
W [auth a]PF17207e7z13a5 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
W [auth a]PF17855e7z13a2 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
W [auth a]PF14551e7z13a4 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
W [auth a]PF00493e7z13a1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
W [auth a]F_UNCLASSIFIEDe7z13a3 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: F_UNCLASSIFIEDECOD (1.6)
J [auth D]PF05916e7z13D2 A: alpha bundlesX: GINS helical bundle-like (From Homology)H: GINS helical bundle-likeT: PSF1 N-terminal domain-likeF: PF05916ECOD (1.6)
J [auth D]PF16922e7z13D1 A: a+b two layersX: L9 N-domain-likeH: GINS/PriA/YqbF domain (From Topology)T: GINS/PriA/YqbF domainF: PF16922ECOD (1.6)
P [auth K]PF05916e7z13K1 A: alpha bundlesX: GINS helical bundle-like (From Homology)H: GINS helical bundle-likeT: PSF1 N-terminal domain-likeF: PF05916ECOD (1.6)
P [auth K]PF16922e7z13K2 A: a+b two layersX: L9 N-domain-likeH: GINS/PriA/YqbF domain (From Topology)T: GINS/PriA/YqbF domainF: PF16922ECOD (1.6)
K [auth E]PF02724e7z13E2 A: alpha arraysX: HhH/H2THH: Cdc45 CID domain (From Topology)T: Cdc45 CID domainF: PF02724ECOD (1.6)
K [auth E]PF02724e7z13E1 A: a+b three layersX: C-terminal domain in DHH phosphoesterases (From Topology)H: C-terminal domain in DHH phosphoesterases (From Topology)T: C-terminal domain in DHH phosphoesterasesF: PF02724ECOD (1.6)
K [auth E]PF02724e7z13E3 A: a/b three-layered sandwichesX: HAD domain-likeH: HAD domain-relatedT: DHH phosphoesterasesF: PF02724ECOD (1.6)
Q [auth L]PF02724e7z13L2 A: alpha arraysX: HhH/H2THH: Cdc45 CID domain (From Topology)T: Cdc45 CID domainF: PF02724ECOD (1.6)
Q [auth L]PF02724e7z13L1 A: a+b three layersX: C-terminal domain in DHH phosphoesterases (From Topology)H: C-terminal domain in DHH phosphoesterases (From Topology)T: C-terminal domain in DHH phosphoesterasesF: PF02724ECOD (1.6)
Q [auth L]PF02724e7z13L3 A: a/b three-layered sandwichesX: HAD domain-likeH: HAD domain-relatedT: DHH phosphoesterasesF: PF02724ECOD (1.6)
L [auth F]F_UNCLASSIFIEDe7z13F1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: F_UNCLASSIFIEDECOD (1.6)
L [auth F]F_UNCLASSIFIEDe7z13F3 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: F_UNCLASSIFIEDECOD (1.6)
L [auth F]PF04042e7z13F2 A: a+b four layersX: Carbon-nitrogen hydrolase-likeH: Metallo-dependent phosphatases (From Topology)T: Metallo-dependent phosphatasesF: PF04042ECOD (1.6)
R [auth M]F_UNCLASSIFIEDe7z13M2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: F_UNCLASSIFIEDECOD (1.6)
R [auth M]F_UNCLASSIFIEDe7z13M3 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: F_UNCLASSIFIEDECOD (1.6)
R [auth M]PF04042e7z13M1 A: a+b four layersX: Carbon-nitrogen hydrolase-likeH: Metallo-dependent phosphatases (From Topology)T: Metallo-dependent phosphatasesF: PF04042ECOD (1.6)
M [auth H]PF05916e7z13H2 A: alpha bundlesX: GINS helical bundle-like (From Homology)H: GINS helical bundle-likeT: PSF1 N-terminal domain-likeF: PF05916ECOD (1.6)
M [auth H]F_UNCLASSIFIEDe7z13H1 A: a+b two layersX: L9 N-domain-likeH: GINS/PriA/YqbF domain (From Topology)T: GINS/PriA/YqbF domainF: F_UNCLASSIFIEDECOD (1.6)
T [auth O]PF05916e7z13O1 A: alpha bundlesX: GINS helical bundle-like (From Homology)H: GINS helical bundle-likeT: PSF1 N-terminal domain-likeF: PF05916ECOD (1.6)
T [auth O]F_UNCLASSIFIEDe7z13O2 A: a+b two layersX: L9 N-domain-likeH: GINS/PriA/YqbF domain (From Topology)T: GINS/PriA/YqbF domainF: F_UNCLASSIFIEDECOD (1.6)
N [auth I]PF05916e7z13I1 A: alpha bundlesX: GINS helical bundle-like (From Homology)H: GINS helical bundle-likeT: PSF2 C-terminal domain-likeF: PF05916ECOD (1.6)
N [auth I]F_UNCLASSIFIEDe7z13I2 A: a+b two layersX: L9 N-domain-likeH: GINS/PriA/YqbF domain (From Topology)T: GINS/PriA/YqbF domainF: F_UNCLASSIFIEDECOD (1.6)
U [auth P]PF05916e7z13P1 A: alpha bundlesX: GINS helical bundle-like (From Homology)H: GINS helical bundle-likeT: PSF2 C-terminal domain-likeF: PF05916ECOD (1.6)
U [auth P]F_UNCLASSIFIEDe7z13P2 A: a+b two layersX: L9 N-domain-likeH: GINS/PriA/YqbF domain (From Topology)T: GINS/PriA/YqbF domainF: F_UNCLASSIFIEDECOD (1.6)
B [auth 3]PF17207e7z1331 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
B [auth 3]PF17855e7z1335 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
B [auth 3]PF14551e7z1332 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
B [auth 3]PF00493e7z1333 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
B [auth 3]F_UNCLASSIFIEDe7z1334 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: F_UNCLASSIFIEDECOD (1.6)
X [auth b]PF17207e7z13b5 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
X [auth b]PF17855e7z13b1 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
X [auth b]PF14551e7z13b3 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
X [auth b]PF00493e7z13b4 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
X [auth b]F_UNCLASSIFIEDe7z13b2 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: F_UNCLASSIFIEDECOD (1.6)
C [auth 4]PF17207e7z1345 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
C [auth 4]PF17855e7z1341 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
C [auth 4]PF14551e7z1342 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
C [auth 4]PF00493e7z1343 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
C [auth 4]PF17207e7z1344 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF17207ECOD (1.6)
Y [auth c]PF17207e7z13c1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
Y [auth c]PF17855e7z13c2 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
Y [auth c]PF14551e7z13c5 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
Y [auth c]PF00493e7z13c3 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
Y [auth c]PF17207e7z13c4 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF17207ECOD (1.6)
D [auth 5]PF17207e7z1355 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
D [auth 5]PF17855e7z1352 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
D [auth 5]PF21933e7z1354 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF21933ECOD (1.6)
D [auth 5]PF14551e7z1356 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
D [auth 5]PF00493e7z1353 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
D [auth 5]F_UNCLASSIFIEDe7z1351 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: F_UNCLASSIFIEDECOD (1.6)
Z [auth d]PF17207e7z13d6 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
Z [auth d]PF17855e7z13d4 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
Z [auth d]PF21933e7z13d3 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF21933ECOD (1.6)
Z [auth d]PF14551e7z13d2 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
Z [auth d]PF00493e7z13d5 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
Z [auth d]F_UNCLASSIFIEDe7z13d1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: F_UNCLASSIFIEDECOD (1.6)
AA [auth e]PF17207e7z13e1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
AA [auth e]PF17855e7z13e2 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
AA [auth e]PF14551e7z13e5 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
AA [auth e]PF00493e7z13e3 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
AA [auth e]PF17207e7z13e4 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF17207ECOD (1.6)
E [auth 6]PF17207e7z1363 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
E [auth 6]PF17855e7z1364 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
E [auth 6]PF14551e7z1362 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
E [auth 6]PF00493e7z1365 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
E [auth 6]PF17207e7z1361 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF17207ECOD (1.6)
BA [auth f]PF17207e7z13f5 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
BA [auth f]PF17855e7z13f1 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
BA [auth f]PF14551e7z13f2 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
BA [auth f]PF00493e7z13f4 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
BA [auth f]F_UNCLASSIFIEDe7z13f3 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: F_UNCLASSIFIEDECOD (1.6)
F [auth 7]PF17207e7z1375 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
F [auth 7]PF17855e7z1373 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
F [auth 7]PF14551e7z1374 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
F [auth 7]PF00493e7z1371 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
F [auth 7]F_UNCLASSIFIEDe7z1372 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: F_UNCLASSIFIEDECOD (1.6)
I [auth C]PF05916e7z13C2 A: alpha bundlesX: GINS helical bundle-like (From Homology)H: GINS helical bundle-likeT: PSF2 C-terminal domain-likeF: PF05916ECOD (1.6)
I [auth C]PF22466e7z13C1 A: a+b two layersX: L9 N-domain-likeH: GINS/PriA/YqbF domain (From Topology)T: GINS/PriA/YqbF domainF: PF22466ECOD (1.6)
O [auth J]PF05916e7z13J1 A: alpha bundlesX: GINS helical bundle-like (From Homology)H: GINS helical bundle-likeT: PSF2 C-terminal domain-likeF: PF05916ECOD (1.6)
O [auth J]PF22466e7z13J2 A: a+b two layersX: L9 N-domain-likeH: GINS/PriA/YqbF domain (From Topology)T: GINS/PriA/YqbF domainF: PF22466ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth 2],
W [auth a]
PF14551MCM N-terminal domain (MCM_N)MCM N-terminal domainThis family contains the N-terminal domain of MCM proteins.Domain
A [auth 2],
W [auth a]
PF00493MCM P-loop domain (MCM)MCM P-loop domain- Domain
A [auth 2],
W [auth a]
PF17855MCM AAA-lid domain (MCM_lid)MCM AAA-lid domainThis entry represents the AAA-lid domain found in MCM proteins.Domain
A [auth 2],
W [auth a]
PF17207MCM OB domain (MCM_OB)MCM OB domainThis family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2].Domain
J [auth D],
P [auth K]
PF05916GINS complex protein helical bundle domain (Sld5)GINS complex protein helical bundle domainThis entry represents the C-terminal alpha helical bundle domain. The eukaryotic GINS complex is essential for the initiation and elongation phases of DNA replication [1-3]. It consists of four paralogous protein subunits (Sld5, Psf1, Psf2 and Psf3) ...This entry represents the C-terminal alpha helical bundle domain. The eukaryotic GINS complex is essential for the initiation and elongation phases of DNA replication [1-3]. It consists of four paralogous protein subunits (Sld5, Psf1, Psf2 and Psf3), all of which are included in this family. The GINS complex is conserved from yeast to humans, and has been shown in human to bind directly to DNA primase [4].
Domain
J [auth D],
P [auth K]
PF14551MCM N-terminal domain (MCM_N)MCM N-terminal domainThis family contains the N-terminal domain of MCM proteins.Domain
J [auth D],
P [auth K]
PF17207MCM OB domain (MCM_OB)MCM OB domainThis family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2].Domain
J [auth D],
P [auth K]
PF16922DNA replication complex GINS protein SLD5 C-terminus (SLD5_C)DNA replication complex GINS protein SLD5 C-terminusThe C-terminal domain of DNA replication complex GINS protein SLD5 is important in the assembly of the GINS complex, a complex which is involved in initiation of DNA replication and progression of DNA replication forks [1].Domain
K [auth E],
Q [auth L]
PF02724CDC45-like protein (CDC45)CDC45-like protein- Family
K [auth E],
Q [auth L]
PF14551MCM N-terminal domain (MCM_N)MCM N-terminal domainThis family contains the N-terminal domain of MCM proteins.Domain
K [auth E],
Q [auth L]
PF00493MCM P-loop domain (MCM)MCM P-loop domain- Domain
K [auth E],
Q [auth L]
PF17207MCM OB domain (MCM_OB)MCM OB domainThis family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2].Domain
L [auth F],
R [auth M]
PF04042DNA polymerase alpha/epsilon subunit B (DNA_pol_E_B)DNA polymerase alpha/epsilon subunit B- Family
M [auth H],
T [auth O]
PF05916GINS complex protein helical bundle domain (Sld5)GINS complex protein helical bundle domainThis entry represents the C-terminal alpha helical bundle domain. The eukaryotic GINS complex is essential for the initiation and elongation phases of DNA replication [1-3]. It consists of four paralogous protein subunits (Sld5, Psf1, Psf2 and Psf3) ...This entry represents the C-terminal alpha helical bundle domain. The eukaryotic GINS complex is essential for the initiation and elongation phases of DNA replication [1-3]. It consists of four paralogous protein subunits (Sld5, Psf1, Psf2 and Psf3), all of which are included in this family. The GINS complex is conserved from yeast to humans, and has been shown in human to bind directly to DNA primase [4].
Domain
N [auth I],
U [auth P]
PF05916GINS complex protein helical bundle domain (Sld5)GINS complex protein helical bundle domainThis entry represents the C-terminal alpha helical bundle domain. The eukaryotic GINS complex is essential for the initiation and elongation phases of DNA replication [1-3]. It consists of four paralogous protein subunits (Sld5, Psf1, Psf2 and Psf3) ...This entry represents the C-terminal alpha helical bundle domain. The eukaryotic GINS complex is essential for the initiation and elongation phases of DNA replication [1-3]. It consists of four paralogous protein subunits (Sld5, Psf1, Psf2 and Psf3), all of which are included in this family. The GINS complex is conserved from yeast to humans, and has been shown in human to bind directly to DNA primase [4].
Domain
S [auth N],
V [auth Q]
PF22912Zinc finger domain of DNA polymerase-epsilon (zf-DPOE)Zinc finger domain of DNA polymerase-epsilonThis zinc finger domain is found in the epsilon subunit of DNA polymerase.Domain
B [auth 3],
X [auth b]
PF14551MCM N-terminal domain (MCM_N)MCM N-terminal domainThis family contains the N-terminal domain of MCM proteins.Domain
B [auth 3],
X [auth b]
PF00493MCM P-loop domain (MCM)MCM P-loop domain- Domain
B [auth 3],
X [auth b]
PF17855MCM AAA-lid domain (MCM_lid)MCM AAA-lid domainThis entry represents the AAA-lid domain found in MCM proteins.Domain
B [auth 3],
X [auth b]
PF17207MCM OB domain (MCM_OB)MCM OB domainThis family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2].Domain
C [auth 4],
Y [auth c]
PF14551MCM N-terminal domain (MCM_N)MCM N-terminal domainThis family contains the N-terminal domain of MCM proteins.Domain
C [auth 4],
Y [auth c]
PF00493MCM P-loop domain (MCM)MCM P-loop domain- Domain
C [auth 4],
Y [auth c]
PF17855MCM AAA-lid domain (MCM_lid)MCM AAA-lid domainThis entry represents the AAA-lid domain found in MCM proteins.Domain
C [auth 4],
Y [auth c]
PF17207MCM OB domain (MCM_OB)MCM OB domainThis family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2].Domain
D [auth 5],
Z [auth d]
PF14551MCM N-terminal domain (MCM_N)MCM N-terminal domainThis family contains the N-terminal domain of MCM proteins.Domain
D [auth 5],
Z [auth d]
PF00493MCM P-loop domain (MCM)MCM P-loop domain- Domain
D [auth 5],
Z [auth d]
PF21933MCM5, C-terminal domain (MCM5_C)MCM5, C-terminal domainThis entry represents the C-terminal domain of MCM5 from humans and its homologues, which is a HTH domain [1]. MCM5 is part of the MCM2-7 complex.Domain
D [auth 5],
Z [auth d]
PF17855MCM AAA-lid domain (MCM_lid)MCM AAA-lid domainThis entry represents the AAA-lid domain found in MCM proteins.Domain
D [auth 5],
Z [auth d]
PF17207MCM OB domain (MCM_OB)MCM OB domainThis family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2].Domain
AA [auth e],
E [auth 6]
PF14551MCM N-terminal domain (MCM_N)MCM N-terminal domainThis family contains the N-terminal domain of MCM proteins.Domain
AA [auth e],
E [auth 6]
PF00493MCM P-loop domain (MCM)MCM P-loop domain- Domain
AA [auth e],
E [auth 6]
PF17855MCM AAA-lid domain (MCM_lid)MCM AAA-lid domainThis entry represents the AAA-lid domain found in MCM proteins.Domain
AA [auth e],
E [auth 6]
PF17207MCM OB domain (MCM_OB)MCM OB domainThis family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2].Domain
H [auth B]PF14551MCM N-terminal domain (MCM_N)MCM N-terminal domainThis family contains the N-terminal domain of MCM proteins.Domain
I [auth C],
O [auth J]
PF05916GINS complex protein helical bundle domain (Sld5)GINS complex protein helical bundle domainThis entry represents the C-terminal alpha helical bundle domain. The eukaryotic GINS complex is essential for the initiation and elongation phases of DNA replication [1-3]. It consists of four paralogous protein subunits (Sld5, Psf1, Psf2 and Psf3) ...This entry represents the C-terminal alpha helical bundle domain. The eukaryotic GINS complex is essential for the initiation and elongation phases of DNA replication [1-3]. It consists of four paralogous protein subunits (Sld5, Psf1, Psf2 and Psf3), all of which are included in this family. The GINS complex is conserved from yeast to humans, and has been shown in human to bind directly to DNA primase [4].
Domain
I [auth C],
O [auth J]
PF22466GINS/PriA/YqbF domain (GINS_N)GINS/PriA/YqbF domainThis entry represents the GINS/PriA/YqbF domain, which is found in the N-terminal region of the GINS complex protein. The GINS complex is crucial for the establishment of DNA replication forks and replisome progression in eukaryotes. The crystal stru ...This entry represents the GINS/PriA/YqbF domain, which is found in the N-terminal region of the GINS complex protein. The GINS complex is crucial for the establishment of DNA replication forks and replisome progression in eukaryotes. The crystal structure of the human GINS complex reveals a heterotetrameric assembly with a pseudo symmetrical layered structure. The complex consists of two heterodimers that create four subunit-subunit interfaces. The subunit structures of the heterodimers consist of two alternating domains, an alpha-helix-rich (A) domain Pfam:PF05916 and a beta-strand-rich (B) domain (this entry).
Domain
I [auth C],
O [auth J]
PF14551MCM N-terminal domain (MCM_N)MCM N-terminal domainThis family contains the N-terminal domain of MCM proteins.Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 2],
W [auth a]
DNA replication licensing factor MCM2
J [auth D],
P [auth K]
DNA replication complex GINS protein SLD5-
K [auth E],
Q [auth L]
Cell division control protein 45
L [auth F],
R [auth M]
DNA polymerase epsilon subunit B
M [auth H],
T [auth O]
DNA replication complex GINS protein PSF1-
N [auth I],
U [auth P]
DNA replication complex GINS protein PSF2-
S [auth N],
V [auth Q]
DNA polymerase epsilon catalytic subunit A
B [auth 3],
X [auth b]
DNA replication licensing factor MCM3
C [auth 4],
Y [auth c]
DNA replication licensing factor MCM4
D [auth 5],
Z [auth d]
DNA helicase
AA [auth e],
E [auth 6]
DNA replication licensing factor MCM6
BA [auth f],
F [auth 7]
DNA replication licensing factor MCM7---
G [auth A]DNA (53-MER)---
H [auth B]DNA (53-MER)---
I [auth C],
O [auth J]
DNA replication complex GINS protein PSF3-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth 2],
W [auth a]
IPR031327Mini-chromosome maintenance proteinFamily
A [auth 2],
W [auth a]
IPR018525Mini-chromosome maintenance, conserved siteConserved Site
A [auth 2],
W [auth a]
IPR001208MCM domainDomain
A [auth 2],
W [auth a]
IPR041562MCM, AAA-lid domainDomain
A [auth 2],
W [auth a]
IPR008045DNA replication licensing factor Mcm2Family
A [auth 2],
W [auth a]
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
A [auth 2],
W [auth a]
IPR027925MCM, N-terminal domainDomain
A [auth 2],
W [auth a]
IPR033762MCM OB domainDomain
A [auth 2],
W [auth a]
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
J [auth D],
P [auth K]
IPR008591GINS complex subunit Sld5Family
J [auth D],
P [auth K]
IPR038749GINS complex protein Sld5, alpha-helical domainDomain
J [auth D],
P [auth K]
IPR036224GINS, helical bundle-like domain superfamilyHomologous Superfamily
J [auth D],
P [auth K]
IPR021151GINS subunit, domain ADomain
J [auth D],
P [auth K]
IPR031633DNA replication complex GINS protein SLD5, C-terminalDomain
K [auth E],
Q [auth L]
IPR003874CDC45 familyFamily
L [auth F],
R [auth M]
IPR016266DNA polymerase epsilon, subunit BFamily
L [auth F],
R [auth M]
IPR007185DNA polymerase alpha/delta/epsilon, subunit BDomain
M [auth H],
T [auth O]
IPR021151GINS subunit, domain ADomain
M [auth H],
T [auth O]
IPR005339GINS complex, subunit Psf1Family
M [auth H],
T [auth O]
IPR036224GINS, helical bundle-like domain superfamilyHomologous Superfamily
N [auth I],
U [auth P]
IPR007257DNA replication complex GINS protein Psf2Family
N [auth I],
U [auth P]
IPR021151GINS subunit, domain ADomain
N [auth I],
U [auth P]
IPR036224GINS, helical bundle-like domain superfamilyHomologous Superfamily
S [auth N],
V [auth Q]
IPR036397Ribonuclease H superfamilyHomologous Superfamily
S [auth N],
V [auth Q]
IPR006134DNA-directed DNA polymerase, family B, multifunctional domainDomain
S [auth N],
V [auth Q]
IPR012337Ribonuclease H-like superfamilyHomologous Superfamily
S [auth N],
V [auth Q]
IPR023211DNA polymerase, palm domain superfamilyHomologous Superfamily
S [auth N],
V [auth Q]
IPR006172DNA-directed DNA polymerase, family BFamily
S [auth N],
V [auth Q]
IPR029703DNA polymerase epsilon catalytic subunitFamily
S [auth N],
V [auth Q]
IPR043502DNA/RNA polymerase superfamilyHomologous Superfamily
S [auth N],
V [auth Q]
IPR013697DNA polymerase epsilon, catalytic subunit A, C-terminalDomain
S [auth N],
V [auth Q]
IPR006133DNA-directed DNA polymerase, family B, exonuclease domainDomain
S [auth N],
V [auth Q]
IPR042087DNA polymerase family B, thumb domainHomologous Superfamily
B [auth 3],
X [auth b]
IPR031327Mini-chromosome maintenance proteinFamily
B [auth 3],
X [auth b]
IPR018525Mini-chromosome maintenance, conserved siteConserved Site
B [auth 3],
X [auth b]
IPR003593AAA+ ATPase domainDomain
B [auth 3],
X [auth b]
IPR001208MCM domainDomain
B [auth 3],
X [auth b]
IPR041562MCM, AAA-lid domainDomain
B [auth 3],
X [auth b]
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
B [auth 3],
X [auth b]
IPR027925MCM, N-terminal domainDomain
B [auth 3],
X [auth b]
IPR008046DNA replication licensing factor Mcm3Family
B [auth 3],
X [auth b]
IPR033762MCM OB domainDomain
B [auth 3],
X [auth b]
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
C [auth 4],
Y [auth c]
IPR031327Mini-chromosome maintenance proteinFamily
C [auth 4],
Y [auth c]
IPR018525Mini-chromosome maintenance, conserved siteConserved Site
C [auth 4],
Y [auth c]
IPR001208MCM domainDomain
C [auth 4],
Y [auth c]
IPR041562MCM, AAA-lid domainDomain
C [auth 4],
Y [auth c]
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
C [auth 4],
Y [auth c]
IPR027925MCM, N-terminal domainDomain
C [auth 4],
Y [auth c]
IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
C [auth 4],
Y [auth c]
IPR008047Mini-chromosome maintenance complex protein 4Family
C [auth 4],
Y [auth c]
IPR033762MCM OB domainDomain
C [auth 4],
Y [auth c]
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
D [auth 5],
Z [auth d]
IPR031327Mini-chromosome maintenance proteinFamily
D [auth 5],
Z [auth d]
IPR018525Mini-chromosome maintenance, conserved siteConserved Site
D [auth 5],
Z [auth d]
IPR001208MCM domainDomain
D [auth 5],
Z [auth d]
IPR041562MCM, AAA-lid domainDomain
D [auth 5],
Z [auth d]
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
D [auth 5],
Z [auth d]
IPR027925MCM, N-terminal domainDomain
D [auth 5],
Z [auth d]
IPR033762MCM OB domainDomain
D [auth 5],
Z [auth d]
IPR008048DNA replication licensing factor Mcm5Family
D [auth 5],
Z [auth d]
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
AA [auth e],
E [auth 6]
IPR008049DNA replication licensing factor Mcm6Family
AA [auth e],
E [auth 6]
IPR041024Mcm6, C-terminal winged-helix domainDomain
AA [auth e],
E [auth 6]
IPR031327Mini-chromosome maintenance proteinFamily
AA [auth e],
E [auth 6]
IPR018525Mini-chromosome maintenance, conserved siteConserved Site
AA [auth e],
E [auth 6]
IPR001208MCM domainDomain
AA [auth e],
E [auth 6]
IPR041562MCM, AAA-lid domainDomain
AA [auth e],
E [auth 6]
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
AA [auth e],
E [auth 6]
IPR027925MCM, N-terminal domainDomain
AA [auth e],
E [auth 6]
IPR033762MCM OB domainDomain
AA [auth e],
E [auth 6]
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
I [auth C],
O [auth J]
IPR036224GINS, helical bundle-like domain superfamilyHomologous Superfamily
I [auth C],
O [auth J]
IPR021151GINS subunit, domain ADomain
I [auth C],
O [auth J]
IPR010492GINS complex, subunit Psf3Family
I [auth C],
O [auth J]
IPR038437GINS complex, subunit Psf3 superfamilyHomologous Superfamily