7XE1
Crystal structure of LSD2 in complex with cis-4-Br-PCPA
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF04433 | e7xe1A1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF04433 | ECOD (1.6) |
A | PF01593 | e7xe1A2 | A: a+b two layers | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C (From Topology) | T: FAD-linked reductases-C | F: PF01593 | ECOD (1.6) |
A | PF01593 | e7xe1A5 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: FAD/NAD(P)-binding domain | F: PF01593 | ECOD (1.6) |
A | PF07496 | e7xe1A4 | A: few secondary structure elements | X: RING/U-box-like | H: RING/U-box-like | T: FYVE/PHD zinc finger | F: PF07496 | ECOD (1.6) |
A | F_UNCLASSIFIED | e7xe1A3 | A: few secondary structure elements | X: C4H2C2-type zinc finger (From Topology) | H: C4H2C2-type zinc finger (From Topology) | T: C4H2C2-type zinc finger | F: F_UNCLASSIFIED | ECOD (1.6) |
B | PF04433 | e7xe1B1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF04433 | ECOD (1.6) |
B | PF01593 | e7xe1B5 | A: a+b two layers | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C (From Topology) | T: FAD-linked reductases-C | F: PF01593 | ECOD (1.6) |
B | PF01593 | e7xe1B2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: FAD/NAD(P)-binding domain | F: PF01593 | ECOD (1.6) |
B | PF07496 | e7xe1B4 | A: few secondary structure elements | X: RING/U-box-like | H: RING/U-box-like | T: FYVE/PHD zinc finger | F: PF07496 | ECOD (1.6) |
B | F_UNCLASSIFIED | e7xe1B3 | A: few secondary structure elements | X: C4H2C2-type zinc finger (From Topology) | H: C4H2C2-type zinc finger (From Topology) | T: C4H2C2-type zinc finger | F: F_UNCLASSIFIED | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF07496 | CW-type Zinc Finger (zf-CW) | CW-type Zinc Finger | This domain appears to be a zinc finger. The alignment shows four conserved cysteine residues and a conserved tryptophan. It was first identified by [1], and is predicted to be a "highly specialised mononuclear four-cysteine zinc finger...that plays ... | Domain | |
PF04433 | SWIRM domain (SWIRM) | SWIRM domain | This SWIRM domain is a small alpha-helical domain of about 85 amino acid residues found in chromosomal proteins. It contains a helix-turn helix motif and binds to DNA [1]. | Domain | |
PF01593 | Flavin containing amine oxidoreductase (Amino_oxidase) | Flavin containing amine oxidoreductase | This family consists of various amine oxidases, including maze polyamine oxidase (PAO) [1] and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR009057 | Homedomain-like superfamily | Homologous Superfamily | |
IPR002937 | Amine oxidase | Domain | |
IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily | |
IPR036188 | FAD/NAD(P)-binding domain superfamily | Homologous Superfamily | |
IPR050281 | Flavin monoamine oxidase and related enzymes | Family | |
IPR007526 | SWIRM domain | Domain | |
IPR011124 | Zinc finger, CW-type | Domain |
Pharos: Disease Associations Pharos Homepage Annotation
Chains | Drug Target   | Associated Disease |
---|---|---|
Q8NB78 | :