7WN8
Crystal structure of antibody (BC31M5) binds to CD47
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | V-set_CD47 | e7wn8A1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_CD47 | ECOD (1.6) |
B [auth C] | V-set_CD47 | e7wn8C1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_CD47 | ECOD (1.6) |
C [auth H] | V-set_8 | e7wn8H1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_8 | ECOD (1.6) |
C [auth H] | C1-set_1 | e7wn8H2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_1 | ECOD (1.6) |
E [auth P] | V-set_8 | e7wn8P1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_8 | ECOD (1.6) |
E [auth P] | C1-set_1 | e7wn8P2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_1 | ECOD (1.6) |
D [auth L] | C1-set_4 | e7wn8L1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_4 | ECOD (1.6) |
D [auth L] | V-set | e7wn8L2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set | ECOD (1.6) |
F [auth Q] | C1-set_4 | e7wn8Q2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_4 | ECOD (1.6) |
F [auth Q] | V-set | e7wn8Q1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set | ECOD (1.6) |
SAbDab Antibody Annotation SAbDab Database Homepage
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
---|---|---|---|---|---|
C [auth H], E [auth P] | Heavy Chain | IGHV1 | - | leukocyte surface antigen cd47 | SAbDab (2024-10-04) |
D [auth L], F [auth Q] | Light Chain | IGKV3 | Kappa | leukocyte surface antigen cd47 | SAbDab (2024-10-04) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, B [auth C] | IPR036179 | Immunoglobulin-like domain superfamily | Homologous Superfamily |
A, B [auth C] | IPR013270 | CD47 immunoglobulin-like | Domain |
A, B [auth C] | IPR013783 | Immunoglobulin-like fold | Homologous Superfamily |
A, B [auth C] | IPR037805 | Leukocyte surface antigen CD47, IgV | Domain |
A, B [auth C] | IPR007110 | Immunoglobulin-like domain | Domain |
A, B [auth C] | IPR006704 | Leukocyte surface antigen CD47 | Family |
A, B [auth C] | IPR013147 | CD47-like, transmembrane | Domain |