7WN4
Cryo-EM structure of VWF D'D3 dimer (wild type) complexed with D1D2 at 3.4 angstron resolution (1 unit)
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth G] | PF00094 | e7wn4G2 | A: beta barrels | X: Repulsive guidance molecule (RGM) family (From Topology) | H: Repulsive guidance molecule (RGM) family (From Topology) | T: Repulsive guidance molecule (RGM) family | F: PF00094 | ECOD (1.6) |
C [auth G] | PF01826 | e7wn4G6 | A: few secondary structure elements | X: EGF-like | H: Serine protease inhibitors (From Topology) | T: Serine protease inhibitors | F: PF01826 | ECOD (1.6) |
C [auth G] | PF08742 | e7wn4G5 | A: few secondary structure elements | X: VWF C8-3 module (From Topology) | H: VWF C8-3 module (From Topology) | T: VWF C8-3 module | F: PF08742 | ECOD (1.6) |
A [auth E] | PF00094 | e7wn4E2 | A: beta barrels | X: Repulsive guidance molecule (RGM) family (From Topology) | H: Repulsive guidance molecule (RGM) family (From Topology) | T: Repulsive guidance molecule (RGM) family | F: PF00094 | ECOD (1.6) |
A [auth E] | PF01826 | e7wn4E6 | A: few secondary structure elements | X: EGF-like | H: Serine protease inhibitors (From Topology) | T: Serine protease inhibitors | F: PF01826 | ECOD (1.6) |
A [auth E] | PF08742 | e7wn4E5 | A: few secondary structure elements | X: VWF C8-3 module (From Topology) | H: VWF C8-3 module (From Topology) | T: VWF C8-3 module | F: PF08742 | ECOD (1.6) |
B [auth F] | PF00094 | e7wn4F3 | A: beta barrels | X: Repulsive guidance molecule (RGM) family (From Topology) | H: Repulsive guidance molecule (RGM) family (From Topology) | T: Repulsive guidance molecule (RGM) family | F: PF00094 | ECOD (1.6) |
B [auth F] | PF01826 | e7wn4F4 | A: few secondary structure elements | X: EGF-like | H: Serine protease inhibitors (From Topology) | T: Serine protease inhibitors | F: PF01826 | ECOD (1.6) |
B [auth F] | PF00093 | e7wn4F6 | A: few secondary structure elements | X: Fibronectin type I module-like (From Homology) | H: Fibronectin type I module-like | T: Fibronectin type I module | F: PF00093 | ECOD (1.6) |
B [auth F] | PF16164 | e7wn4F2 | A: few secondary structure elements | X: Fibronectin type I module-like (From Homology) | H: Fibronectin type I module-like | T: Fibronectin type I module | F: PF16164 | ECOD (1.6) |
B [auth F] | PF08742 | e7wn4F5 | A: few secondary structure elements | X: VWF C8-3 module (From Topology) | H: VWF C8-3 module (From Topology) | T: VWF C8-3 module | F: PF08742 | ECOD (1.6) |
D [auth H] | PF00094 | e7wn4H3 | A: beta barrels | X: Repulsive guidance molecule (RGM) family (From Topology) | H: Repulsive guidance molecule (RGM) family (From Topology) | T: Repulsive guidance molecule (RGM) family | F: PF00094 | ECOD (1.6) |
D [auth H] | PF01826 | e7wn4H4 | A: few secondary structure elements | X: EGF-like | H: Serine protease inhibitors (From Topology) | T: Serine protease inhibitors | F: PF01826 | ECOD (1.6) |
D [auth H] | PF00093 | e7wn4H2 | A: few secondary structure elements | X: Fibronectin type I module-like (From Homology) | H: Fibronectin type I module-like | T: Fibronectin type I module | F: PF00093 | ECOD (1.6) |
D [auth H] | PF16164 | e7wn4H5 | A: few secondary structure elements | X: Fibronectin type I module-like (From Homology) | H: Fibronectin type I module-like | T: Fibronectin type I module | F: PF16164 | ECOD (1.6) |
D [auth H] | PF08742 | e7wn4H1 | A: few secondary structure elements | X: VWF C8-3 module (From Topology) | H: VWF C8-3 module (From Topology) | T: VWF C8-3 module | F: PF08742 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth E], C [auth G] | PF08742 | C8 domain (C8) | C8 domain | This domain contains 8 conserved cysteine residues, but this family only contains 7 of them to overlaps with other domains. It is found in disease-related proteins including von Willebrand factor, Alpha tectorin, Zonadhesin and Mucin. It is often fo ... | Domain |
A [auth E], C [auth G] | PF01826 | Trypsin Inhibitor like cysteine rich domain (TIL) | Trypsin Inhibitor like cysteine rich domain | This family contains trypsin inhibitors as well as a domain found in many extracellular proteins. The domain typically contains ten cysteine residues that form five disulphide bonds. The cysteine residues that form the disulphide bonds are 1-7, 2-6, ... | Domain |
A [auth E], C [auth G] | PF00094 | von Willebrand factor type D domain (VWD) | von Willebrand factor type D domain | Swiss:P17554 contains a vwd domain. Its function is unrelated but the similarity is very strong by several methods. This domain is structurally homologous to the C-terminal domain of repulsive guidance molecules (RGM) despite low sequence identity [2 ... | Domain |
B [auth F], D [auth H] | PF08742 | C8 domain (C8) | C8 domain | This domain contains 8 conserved cysteine residues, but this family only contains 7 of them to overlaps with other domains. It is found in disease-related proteins including von Willebrand factor, Alpha tectorin, Zonadhesin and Mucin. It is often fo ... | Domain |
B [auth F], D [auth H] | PF01826 | Trypsin Inhibitor like cysteine rich domain (TIL) | Trypsin Inhibitor like cysteine rich domain | This family contains trypsin inhibitors as well as a domain found in many extracellular proteins. The domain typically contains ten cysteine residues that form five disulphide bonds. The cysteine residues that form the disulphide bonds are 1-7, 2-6, ... | Domain |
B [auth F], D [auth H] | PF16164 | VWA N-terminal (VWA_N2) | VWA N-terminal | - | Family |
B [auth F], D [auth H] | PF00094 | von Willebrand factor type D domain (VWD) | von Willebrand factor type D domain | Swiss:P17554 contains a vwd domain. Its function is unrelated but the similarity is very strong by several methods. This domain is structurally homologous to the C-terminal domain of repulsive guidance molecules (RGM) despite low sequence identity [2 ... | Domain |