Annotations: 7VLD

Oxy-deoxy intermediate of V2 hemoglobin at 69% oxygen saturation

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
H	SCOP2B Superfamily	Globin-like	8066407	3000554	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Globin-like	8066407	3000554	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Globin-like	8066403	3000554	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Globin-like	8066403	3000554	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Globin-like	8061727	3000554	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Globin-like	8061727	3000554	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Globin-like	8066395	3000554	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Globin-like	8066395	3000554	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
H	Peptidase_C30	e7vldH1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_C30	ECOD (v294.2)
D	Peptidase_C30	e7vldD1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_C30	ECOD (v294.2)
G	Peptidase_C30	e7vldG1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_C30	ECOD (v294.2)
C	Peptidase_C30	e7vldC1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_C30	ECOD (v294.2)
F	Peptidase_C30	e7vldF1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_C30	ECOD (v294.2)
B	Peptidase_C30	e7vldB1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_C30	ECOD (v294.2)
E	Peptidase_C30	e7vldE1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_C30	ECOD (v294.2)
A	Peptidase_C30	e7vldA1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_C30	ECOD (v294.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
D, H	Extracellular B1 globin	oxygen binding binding small molecule binding oxygen carrier activity molecular carrier activity tetrapyrrole binding heme binding cation binding transition metal ion binding iron ion binding ion binding metal ion binding	-	protein-containing complex cellular anatomical structure intracellular anatomical structure hemoglobin complex cytoplasm cytosol extracellular region
C, G	Extracellular B2 globin	oxygen binding binding small molecule binding oxygen carrier activity molecular carrier activity tetrapyrrole binding heme binding cation binding transition metal ion binding iron ion binding ion binding metal ion binding	-	protein-containing complex cellular anatomical structure intracellular anatomical structure hemoglobin complex cytoplasm cytosol extracellular region
B, F	Extracellular A2 globin	oxygen binding binding small molecule binding oxygen carrier activity molecular carrier activity tetrapyrrole binding heme binding cation binding transition metal ion binding iron ion binding ion binding metal ion binding	-	protein-containing complex cellular anatomical structure intracellular anatomical structure hemoglobin complex cytoplasm cytosol extracellular region
A, E	Extracellular A1 globin	oxygen binding binding small molecule binding oxygen carrier activity molecular carrier activity tetrapyrrole binding heme binding cation binding transition metal ion binding iron ion binding ion binding metal ion binding	-	protein-containing complex cellular anatomical structure intracellular anatomical structure hemoglobin complex cytoplasm cytosol extracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
D, H	IPR044399	Myoglobin-like, M family globin domain	Domain
D, H	IPR014610	Globin, extracellular	Family
D, H	IPR009050	Globin-like superfamily	Homologous Superfamily
D, H	IPR000971	Globin	Domain
D, H	IPR012292	Globin/Protoglobin	Homologous Superfamily
C, G	IPR044399	Myoglobin-like, M family globin domain	Domain
C, G	IPR014610	Globin, extracellular	Family
C, G	IPR009050	Globin-like superfamily	Homologous Superfamily
C, G	IPR000971	Globin	Domain
C, G	IPR012292	Globin/Protoglobin	Homologous Superfamily
B, F	IPR044399	Myoglobin-like, M family globin domain	Domain
B, F	IPR002336	Erythrocruorin	Family
B, F	IPR009050	Globin-like superfamily	Homologous Superfamily
B, F	IPR012292	Globin/Protoglobin	Homologous Superfamily
B, F	IPR014610	Globin, extracellular	Family
B, F	IPR031305	Casein alpha/beta, conserved site	Conserved Site
B, F	IPR000971	Globin	Domain
B, F	IPR050532	Globin-like Oxygen Transporters	Family
A, E	IPR044399	Myoglobin-like, M family globin domain	Domain
A, E	IPR014610	Globin, extracellular	Family
A, E	IPR009050	Globin-like superfamily	Homologous Superfamily
A, E	IPR000971	Globin	Domain
A, E	IPR012292	Globin/Protoglobin	Homologous Superfamily

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

7VLD | pdb_00007vld

Oxy-deoxy intermediate of V2 hemoglobin at 69% oxygen saturation

External Resource: Annotation

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Domain Annotation: ECOD Classification ECOD Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage