Structure of the PDZ deleted variant of HtrA2 protease (S306A)


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ESCOP2B SuperfamilyTrypsin-like serine proteases 8041230 3000114 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyTrypsin-like serine proteases 8041230 3000114 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyTrypsin-like serine proteases 8041230 3000114 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyTrypsin-like serine proteases 8041230 3000114 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyTrypsin-like serine proteases 8041230 3000114 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyTrypsin-like serine proteases 8041230 3000114 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
EPeptidase_C30e7vgeE1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Peptidase_C30ECOD (v294.2)
DPeptidase_C30e7vgeD1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Peptidase_C30ECOD (v294.2)
FPeptidase_C30e7vgeF1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Peptidase_C30ECOD (v294.2)
CPeptidase_C30e7vgeC1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Peptidase_C30ECOD (v294.2)
BPeptidase_C30e7vgeB1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Peptidase_C30ECOD (v294.2)
APeptidase_C30e7vgeA1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Peptidase_C30ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF13365Trypsin-like peptidase domain (Trypsin_2)Trypsin-like peptidase domainThis family includes trypsin-like peptidase domains. Domain
D, F
PF13365Trypsin-like peptidase domain (Trypsin_2)Trypsin-like peptidase domainThis family includes trypsin-like peptidase domains. Domain
A, B, C
PF13365Trypsin-like peptidase domain (Trypsin_2)Trypsin-like peptidase domainThis family includes trypsin-like peptidase domains. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Serine protease HTRA2, mitochondrial
D, F
Serine protease HTRA2, mitochondrial
A, B, C
Serine protease HTRA2, mitochondrial

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR009003Peptidase S1, PA clanHomologous Superfamily
IPR001940Peptidase S1CFamily
IPR041489PDZ domain 6Domain
IPR036034PDZ superfamilyHomologous Superfamily
IPR001478PDZ domainDomain
D, F
IPR009003Peptidase S1, PA clanHomologous Superfamily
D, F
IPR001940Peptidase S1CFamily
D, F
IPR041489PDZ domain 6Domain
D, F
IPR036034PDZ superfamilyHomologous Superfamily
D, F
IPR001478PDZ domainDomain
A, B, C
IPR009003Peptidase S1, PA clanHomologous Superfamily
A, B, C
IPR001940Peptidase S1CFamily
A, B, C
IPR041489PDZ domain 6Domain
A, B, C
IPR036034PDZ superfamilyHomologous Superfamily
A, B, C
IPR001478PDZ domainDomain