7VFL
Crystal structure of SdgB (UDP, NAG, and O-glycosylated SD peptide-binding form)
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Ring_hydroxyl_B | e7vflA3 | A: beta meanders | X: O-GlcNAc transferase GtfA beta-meander domain (From Topology) | H: O-GlcNAc transferase GtfA beta-meander domain (From Topology) | T: O-GlcNAc transferase GtfA beta-meander domain | F: Ring_hydroxyl_B | ECOD (1.6) |
A | Glycos_transf_1 | e7vflA2 | A: a/b three-layered sandwiches | X: UDP-Glycosyltransferase/glycogen phosphorylase (From Topology) | H: UDP-Glycosyltransferase/glycogen phosphorylase (From Topology) | T: UDP-Glycosyltransferase/glycogen phosphorylase | F: Glycos_transf_1 | ECOD (1.6) |
A | TIGR02918_1st | e7vflA1 | A: a/b three-layered sandwiches | X: UDP-Glycosyltransferase/glycogen phosphorylase (From Topology) | H: UDP-Glycosyltransferase/glycogen phosphorylase (From Topology) | T: UDP-Glycosyltransferase/glycogen phosphorylase | F: TIGR02918_1st | ECOD (1.6) |
B [auth C] | Ring_hydroxyl_B | e7vflC3 | A: beta meanders | X: O-GlcNAc transferase GtfA beta-meander domain (From Topology) | H: O-GlcNAc transferase GtfA beta-meander domain (From Topology) | T: O-GlcNAc transferase GtfA beta-meander domain | F: Ring_hydroxyl_B | ECOD (1.6) |
B [auth C] | Glycos_transf_1 | e7vflC2 | A: a/b three-layered sandwiches | X: UDP-Glycosyltransferase/glycogen phosphorylase (From Topology) | H: UDP-Glycosyltransferase/glycogen phosphorylase (From Topology) | T: UDP-Glycosyltransferase/glycogen phosphorylase | F: Glycos_transf_1 | ECOD (1.6) |
B [auth C] | TIGR02918_1st | e7vflC1 | A: a/b three-layered sandwiches | X: UDP-Glycosyltransferase/glycogen phosphorylase (From Topology) | H: UDP-Glycosyltransferase/glycogen phosphorylase (From Topology) | T: UDP-Glycosyltransferase/glycogen phosphorylase | F: TIGR02918_1st | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, B [auth C] | PF00534 | Glycosyl transferases group 1 (Glycos_transf_1) | Glycosyl transferases group 1 | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A, B [auth C] | Glycosyl transferase, group 1 family protein | - | ||
C [auth D], D [auth G] | SER-ASP-SER-ASP-SER-ASP-SER-ASP | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, B [auth C] | IPR001296 | Glycosyl transferase, family 1 | Domain |