7VDS
The structure of cyclin-dependent kinase 5 (CDK5) in complex with p25 and Compound 24
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Protein kinase-like (PK-like) | 8042884 | 3000066 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Protein kinase-like (PK-like) | 8042884 | 3000066 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Cyclin-like | 8042885 | 3000768 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Cyclin-like | 8042885 | 3000768 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Pkinase_Tyr | e7vdsA1 | A: a+b complex topology | X: Protein kinase/SAICAR synthase/ATP-grasp (From Homology) | H: Protein kinase/SAICAR synthase/ATP-grasp | T: Protein kinase | F: Pkinase_Tyr | ECOD (1.6) |
B | Pkinase_Tyr | e7vdsB1 | A: a+b complex topology | X: Protein kinase/SAICAR synthase/ATP-grasp (From Homology) | H: Protein kinase/SAICAR synthase/ATP-grasp | T: Protein kinase | F: Pkinase_Tyr | ECOD (1.6) |
C | CDK5_activator | e7vdsC1 | A: alpha arrays | X: HTH | H: HTH | T: Cyclin-like | F: CDK5_activator | ECOD (1.6) |
D | CDK5_activator | e7vdsD1 | A: alpha arrays | X: HTH | H: HTH | T: Cyclin-like | F: CDK5_activator | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00069 | Protein kinase domain (Pkinase) | Protein kinase domain | - | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000719 | Protein kinase domain | Domain | |
IPR017441 | Protein kinase, ATP binding site | Binding Site | |
IPR008271 | Serine/threonine-protein kinase, active site | Active Site | |
IPR050108 | Cyclin-dependent kinase | Family | |
IPR011009 | Protein kinase-like domain superfamily | Homologous Superfamily | |
IPR004944 | Cyclin-dependent kinase 5 activator | Family | |
IPR036915 | Cyclin-like superfamily | Homologous Superfamily |