7VD6 | pdb_00007vd6

Structure of S1M1-type FCPII complex from diatom

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: OPM

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
K [auth 21]	Peptidase_C30	e7vd6211	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_C30	ECOD (v294.2)
J [auth 20]	Peptidase_C30	e7vd6201	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_C30	ECOD (v294.2)
I [auth 19]	Peptidase_C30	e7vd6191	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_C30	ECOD (v294.2)
G [auth 17]	Peptidase_C30	e7vd6171	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_C30	ECOD (v294.2)
F [auth 16]	Peptidase_C30	e7vd6161	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_C30	ECOD (v294.2)
B [auth 12]	Peptidase_C30	e7vd6121	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_C30	ECOD (v294.2)
H [auth 18]	Peptidase_C30	e7vd6181	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_C30	ECOD (v294.2)
E [auth 15]	Peptidase_C30	e7vd6151	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_C30	ECOD (v294.2)
D [auth 14]	Peptidase_C30	e7vd6141	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_C30	ECOD (v294.2)
C [auth 13]	Peptidase_C30	e7vd6131	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_C30	ECOD (v294.2)
A [auth 11]	Peptidase_C30	e7vd6111	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_C30	ECOD (v294.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
K [auth 21]	Fcpb7, Fucoxanthin chlorophyll a/c-binding protein	-	-	-
J [auth 20]	Fcpb6, Fucoxanthin chlorophyll a/c-binding protein	-	-	-
I [auth 19]	Fcpb5, Fucoxanthin chlorophyll a/c-binding protein	-	-	-
G [auth 17]	Fcpb4, Fucoxanthin chlorophyll a/c-binding protein	-	-	-
F [auth 16]	Fcpb3, Fucoxanthin chlorophyll a/c-binding protein	-	-	-
B [auth 12]	Fcpb2, Fucoxanthin chlorophyll a/c-binding protein	-	-	-
A [auth 11], C [auth 13], D [auth 14], E [auth 15], H [auth 18]	Chlorophyll a/b-binding protein	chlorophyll binding binding tetrapyrrole binding	photosynthesis photosynthesis, light reaction photosynthesis, light harvesting metabolic process cellular process generation of precursor metabolites and energy	cellular anatomical structure membrane membrane-bounded organelle intracellular organelle intracellular anatomical structure plastid organelle cytoplasm intracellular membrane-bounded organelle chloroplast protein-containing complex light-harvesting complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth 11], C [auth 13], D [auth 14], E [auth 15], H [auth 18]	IPR001344	Chlorophyll A-B binding protein, plant and chromista	Family
A [auth 11], C [auth 13], D [auth 14], E [auth 15], H [auth 18]	IPR022796	Chlorophyll A-B binding protein	Family

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
A [auth 11], C [auth 13], D [auth 14], E [auth 15], H [auth 18]	OPM	Transmembrane	Alpha-helical polytopic	Photosystems	Light-harvesting complexes from chloroplasts

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.