7VAF
Cryo-EM structure of Rat NTCP complexed with YN69202Fab
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth L] | C1-set_4 | e7vafL1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_4 | ECOD (1.6) |
B [auth L] | V-set | e7vafL2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set | ECOD (1.6) |
A [auth H] | V-set_8 | e7vafH1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_8 | ECOD (1.6) |
A [auth H] | C1-set_1 | e7vafH2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_1 | ECOD (1.6) |
C [auth A] | SBF | e7vafA1 | A: alpha complex topology | X: Cation-proton antiporter | H: Cation-proton antiporter (CPA) (From Topology) | T: Cation-proton antiporter (CPA) | F: SBF | ECOD (1.6) |
SAbDab Antibody Annotation SAbDab Database Homepage
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
---|---|---|---|---|---|
B [auth L] | Light Chain | IGKV8 | Kappa | sodium/bile acid cotransporter | SAbDab (2024-10-25) |
A [auth H] | Heavy Chain | IGHV1 | - | sodium/bile acid cotransporter | SAbDab (2024-10-25) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
C [auth A] | PF01758 | Sodium Bile acid symporter family (SBF) | Sodium Bile acid symporter family | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
C [auth A] | IPR004710 | Bile acid:sodium symporter | Family |
C [auth A] | IPR002657 | Bile acid:sodium symporter/arsenical resistance protein Acr3 | Family |
C [auth A] | IPR038770 | Sodium/solute symporter superfamily | Homologous Superfamily |
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | Monovalent cation-proton antiporter | Bile Acid:Na+ Symporter (BASS) Family |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |