7UIG

Mediator-PIC Early (Mediator A)


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
D [auth g]SCOP2B SuperfamilyMediator subcomplex-like8034652 3001613 SCOP2B (2022-06-29)
H [auth k]SCOP2B SuperfamilyMediator subcomplex-like8051777 3001613 SCOP2B (2022-06-29)
J [auth q]SCOP2B SuperfamilyMediator of RNA polymerase II transcription subunit 178091516 3002517 SCOP2B (2022-06-29)
K [auth r]SCOP2B SuperfamilyCYTH-like phosphatases8090011 3001426 SCOP2B (2022-06-29)
O [auth v]SCOP2B SuperfamilyMediator subcomplex-like8051778 3001613 SCOP2B (2022-06-29)
P [auth w]SCOP2B SuperfamilyMediator of RNA polymerase II transcription subunit 318105980 3002846 SCOP2B (2022-06-29)
M [auth t]SCOP2B SuperfamilyCYTH-like phosphatases8091513 3001426 SCOP2B (2022-06-29)
C [auth f]SCOP2B SuperfamilyMediator of RNA polymerase II transcription subunit 68091511 3002516 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
D [auth g]PF05983e7uigg1 A: alpha duplicates or obligate multimersX: Mediator hinge subcomplex-like (From Homology)H: Mediator hinge subcomplex-likeT: MED7 hinge regionF: PF05983ECOD (1.6)
D [auth g]PF05983e7uigg2 A: a+b complex topologyX: Mediator of RNA polymerase II transcription submodule Med7N/31 (From Topology)H: Mediator of RNA polymerase II transcription submodule Med7N/31 (From Topology)T: Mediator of RNA polymerase II transcription submodule Med7N/31F: PF05983ECOD (1.6)
H [auth k]PF10280e7uigk1 A: a+b complex topologyX: Mediator of RNA polymerase II transcription subunit 11 (From Topology)H: Mediator of RNA polymerase II transcription subunit 11 (From Topology)T: Mediator of RNA polymerase II transcription subunit 11F: PF10280ECOD (1.6)
K [auth r]PF09637e7uigr1 A: a+b complex topologyX: mRNA triphosphatase CET1-related (From Topology)H: mRNA triphosphatase CET1-related (From Topology)T: mRNA triphosphatase CET1-relatedF: PF09637ECOD (1.6)
N [auth u]PF11221e7uigu1 A: alpha duplicates or obligate multimersX: Mediator hinge subcomplex-like (From Homology)H: Mediator hinge subcomplex-likeT: RNA polymerase II holoenzyme component SRB7 (MED21)F: PF11221ECOD (1.6)
O [auth v]PF06179e7uigv1 A: a+b complex topologyX: Mediator of RNA polymerase II transcription subunit 22 (From Topology)H: Mediator of RNA polymerase II transcription subunit 22 (From Topology)T: Mediator of RNA polymerase II transcription subunit 22F: PF06179ECOD (1.6)
P [auth w]PF05669e7uigw1 A: a+b complex topologyX: Mediator of RNA polymerase II transcription submodule Med7N/31 (From Topology)H: Mediator of RNA polymerase II transcription submodule Med7N/31 (From Topology)T: Mediator of RNA polymerase II transcription submodule Med7N/31F: PF05669ECOD (1.6)
M [auth t]PF08612e7uigt1 A: a+b complex topologyX: mRNA triphosphatase CET1-related (From Topology)H: mRNA triphosphatase CET1-related (From Topology)T: mRNA triphosphatase CET1-relatedF: PF08612ECOD (1.6)
C [auth f]PF04934e7uigf1 A: extended segmentsX: Mediator of RNA polymerase II transcription subunit 6 (From Topology)H: Mediator of RNA polymerase II transcription subunit 6 (From Topology)T: Mediator of RNA polymerase II transcription subunit 6F: PF04934ECOD (1.6)
E [auth h]PF10232e7uigh1 A: a+b complex topologyX: Mediator of RNA polymerase II transcription subunit 8 (From Topology)H: Mediator of RNA polymerase II transcription subunit 8 (From Topology)T: Mediator of RNA polymerase II transcription subunit 8F: PF10232ECOD (1.6)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B [auth d]Mediator of RNA polymerase II transcription subunit 4
D [auth g]Mediator of RNA polymerase II transcription subunit 7
F [auth i]Mediator of RNA polymerase II transcription subunit 9
H [auth k]Mediator of RNA polymerase II transcription subunit 11
I [auth n]Mediator of RNA polymerase II transcription subunit 14
J [auth q]Mediator of RNA polymerase II transcription subunit 17
K [auth r]Mediator of RNA polymerase II transcription subunit 18
L [auth s]Mediator of RNA polymerase II transcription subunit 19
N [auth u]Mediator of RNA polymerase II transcription subunit 21
O [auth v]Mediator of RNA polymerase II transcription subunit 22
P [auth w]Mediator of RNA polymerase II transcription subunit 31
Q [auth z]DNA-directed RNA polymerase II subunit RPB1
A [auth a]Mediator of RNA polymerase II transcription subunit 1
M [auth t]Mediator of RNA polymerase II transcription subunit 20
C [auth f]Mediator of RNA polymerase II transcription subunit 6
E [auth h]Mediator of RNA polymerase II transcription subunit 8
G [auth j]Mediator of RNA polymerase II transcription subunit 10

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
B [auth d]IPR019258Mediator complex, subunit Med4Family
D [auth g]IPR037212Mediator complex, subunit Med7/Med21-likeHomologous Superfamily
D [auth g]IPR009244Mediator complex, subunit Med7Family
D [auth g]IPR044888Mediator complex, subunit Med7 superfmailyHomologous Superfamily
F [auth i]IPR011425Mediator of RNA polymerase II transcription subunit 9Family
H [auth k]IPR019404Mediator complex, subunit Med11Family
I [auth n]IPR013947Mediator complex, subunit Med14Family
J [auth q]IPR019313Mediator complex, subunit Med17Family
K [auth r]IPR019095Mediator complex, subunit Med18Family
L [auth s]IPR013942Mediator complex, subunit Med19, fungiFamily
N [auth u]IPR037212Mediator complex, subunit Med7/Med21-likeHomologous Superfamily
N [auth u]IPR021384Mediator complex, subunit Med21Family
O [auth v]IPR009332Mediator of RNA polymerase II transcription subunit 22Family
O [auth v]IPR016530Mediator of RNA polymerase II transcription subunit 22, SaccharomycetesFamily
P [auth w]IPR008831Mediator complex, subunit Med31Family
P [auth w]IPR038089Mediator of RNA polymerase II, subunit Med31 superfamilyHomologous Superfamily
Q [auth z]IPR007081RNA polymerase Rpb1, domain 5Domain
Q [auth z]IPR045867DNA-directed RNA polymerase, subunit beta-primeFamily
Q [auth z]IPR007075RNA polymerase Rpb1, domain 6Domain
Q [auth z]IPR000684RNA polymerase II, heptapeptide repeat, eukaryoticRepeat
Q [auth z]IPR007083RNA polymerase Rpb1, domain 4Domain
Q [auth z]IPR044893RNA polymerase Rpb1, clamp domain superfamilyHomologous Superfamily
Q [auth z]IPR006592RNA polymerase, N-terminalDomain
Q [auth z]IPR007066RNA polymerase Rpb1, domain 3Domain
Q [auth z]IPR007073RNA polymerase Rpb1, domain 7Domain
Q [auth z]IPR042102RNA polymerase Rpb1, domain 3 superfamilyHomologous Superfamily
Q [auth z]IPR038593RNA polymerase Rpb1, domain 7 superfamilyHomologous Superfamily
Q [auth z]IPR000722RNA polymerase, alpha subunitDomain
Q [auth z]IPR038120RNA polymerase Rpb1, funnel domain superfamilyHomologous Superfamily
Q [auth z]IPR007080RNA polymerase Rpb1, domain 1Domain
A [auth a]IPR019680Mediator complex, subunit Med1Domain
M [auth t]IPR013921Mediator complex, subunit Med20Family
M [auth t]IPR016532Mediator of RNA polymerase II transcription subunit 20Family
C [auth f]IPR007018Mediator complex, subunit Med6Family
C [auth f]IPR016612Mediator complex, subunit Med6, fungiFamily
C [auth f]IPR038566Mediator complex, subunit Med6 superfamilyHomologous Superfamily
E [auth h]IPR019364Mediator complex, subunit Med8, fungi/metazoaFamily
G [auth j]IPR019145Mediator complex, subunit Med10Family