7UEB
Photosynthetic assembly of Chlorobaculum tepidum (RC-FMO2)
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
I [auth U] | SCOP2B Superfamily | Bacteriochlorophyll A protein | 8043010 | 3001696 | SCOP2B (2022-06-29) |
L [auth X] | SCOP2B Superfamily | Bacteriochlorophyll A protein | 8043010 | 3001696 | SCOP2B (2022-06-29) |
J [auth V] | SCOP2B Superfamily | Bacteriochlorophyll A protein | 8043010 | 3001696 | SCOP2B (2022-06-29) |
K [auth W] | SCOP2B Superfamily | Bacteriochlorophyll A protein | 8043010 | 3001696 | SCOP2B (2022-06-29) |
M [auth Y] | SCOP2B Superfamily | Bacteriochlorophyll A protein | 8043010 | 3001696 | SCOP2B (2022-06-29) |
N [auth Z] | SCOP2B Superfamily | Bacteriochlorophyll A protein | 8043010 | 3001696 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00223 | e7uebA2 | A: alpha bundles | X: Bacterial photosystem II reaction centre L and M subunits-like (From Topology) | H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology) | T: Bacterial photosystem II reaction centre L and M subunits-like | F: PF00223 | ECOD (1.6) |
A | F_UNCLASSIFIED | e7uebA1 | A: alpha bundles | X: Photosystem II antenna protein-like (From Topology) | H: Photosystem II antenna protein-like (From Topology) | T: Photosystem II antenna protein-like | F: F_UNCLASSIFIED | ECOD (1.6) |
B [auth a] | PF00223 | e7ueba2 | A: alpha bundles | X: Bacterial photosystem II reaction centre L and M subunits-like (From Topology) | H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology) | T: Bacterial photosystem II reaction centre L and M subunits-like | F: PF00223 | ECOD (1.6) |
B [auth a] | F_UNCLASSIFIED | e7ueba1 | A: alpha bundles | X: Photosystem II antenna protein-like (From Topology) | H: Photosystem II antenna protein-like (From Topology) | T: Photosystem II antenna protein-like | F: F_UNCLASSIFIED | ECOD (1.6) |
G [auth E] | PF08279 | e7uebE1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF08279 | ECOD (1.6) |
I [auth U] | PF02327 | e7uebU1 | A: a+b two layers | X: Bacteriochlorophyll A protein (From Topology) | H: Bacteriochlorophyll A protein (From Topology) | T: Bacteriochlorophyll A protein | F: PF02327 | ECOD (1.6) |
L [auth X] | PF02327 | e7uebX1 | A: a+b two layers | X: Bacteriochlorophyll A protein (From Topology) | H: Bacteriochlorophyll A protein (From Topology) | T: Bacteriochlorophyll A protein | F: PF02327 | ECOD (1.6) |
J [auth V] | PF02327 | e7uebV1 | A: a+b two layers | X: Bacteriochlorophyll A protein (From Topology) | H: Bacteriochlorophyll A protein (From Topology) | T: Bacteriochlorophyll A protein | F: PF02327 | ECOD (1.6) |
K [auth W] | PF02327 | e7uebW1 | A: a+b two layers | X: Bacteriochlorophyll A protein (From Topology) | H: Bacteriochlorophyll A protein (From Topology) | T: Bacteriochlorophyll A protein | F: PF02327 | ECOD (1.6) |
M [auth Y] | PF02327 | e7uebY1 | A: a+b two layers | X: Bacteriochlorophyll A protein (From Topology) | H: Bacteriochlorophyll A protein (From Topology) | T: Bacteriochlorophyll A protein | F: PF02327 | ECOD (1.6) |
N [auth Z] | PF02327 | e7uebZ1 | A: a+b two layers | X: Bacteriochlorophyll A protein (From Topology) | H: Bacteriochlorophyll A protein (From Topology) | T: Bacteriochlorophyll A protein | F: PF02327 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, B [auth a] | PF00223 | Photosystem I psaA/psaB protein (PsaA_PsaB) | Photosystem I psaA/psaB protein | - | Family |
C [auth B] | PF12838 | 4Fe-4S dicluster domain (Fer4_7) | 4Fe-4S dicluster domain | Superfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contai ... | Domain |
G [auth E] | PF08279 | HTH domain (HTH_11) | HTH domain | This family includes helix-turn-helix domains in a wide variety of proteins. | Domain |
PF02327 | Bacteriochlorophyll A protein (BChl_A) | Bacteriochlorophyll A protein | Bacteriochlorophyll A protein is involved in the energy transfer system of green photosynthetic bacteria. The protein forms a homotrimer, with each monomer unit containing seven molecules of bacteriochlorophyll A. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A, B [auth a] | Photosystem P840 reaction center, large subunit | - | ||
C [auth B] | Photosystem P840 reaction center iron-sulfur protein | - | - | |
D [auth C], E [auth c] | Cytochrome c | |||
F [auth D] | P840 reaction center 17 kDa protein | - | - | |
G [auth E] | PscE | - | - | - |
H [auth F] | PscF | - | - | |
Bacteriochlorophyll a protein | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, B [auth a] | IPR036408 | Photosystem I PsaA/PsaB superfamily | Homologous Superfamily |
A, B [auth a] | IPR001280 | Photosystem I PsaA/PsaB | Family |
C [auth B] | IPR017900 | 4Fe-4S ferredoxin, iron-sulphur binding, conserved site | Conserved Site |
C [auth B] | IPR017896 | 4Fe-4S ferredoxin-type, iron-sulphur binding domain | Domain |
D [auth C], E [auth c] | IPR036909 | Cytochrome c-like domain superfamily | Homologous Superfamily |
D [auth C], E [auth c] | IPR019604 | Photosystem P840 reaction-centre, cytochrome c-551 | Family |
F [auth D] | IPR019608 | Photosystem I P840 reaction centre protein PscD | Family |
G [auth E] | IPR013196 | Helix-turn-helix, type 11 | Domain |
G [auth E] | IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily |
G [auth E] | IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily |
H [auth F] | IPR000612 | Proteolipid membrane potential modulator | Family |
IPR036559 | Bacteriochlorophyll A superfamily | Homologous Superfamily | |
IPR003426 | Bacteriochlorophyll A protein | Family |
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | Photosystems | Bacterial photosystems |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
Chains | Resource Link | Group | Subgroup | Protein |
---|---|---|---|---|
mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | Light-Harvesting+Reaction Center Complexes | Photosynthetic assembly RC-FMO2 |