Crystal Structure of the Soluble Domain of the Putative OmpA -Family Membrane Protein YPO0514 from Yersinia pestis
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | Hemagglutinin | e7thwA1 | A: beta barrels | X: Nuclear receptor ligand-binding domain | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Hemagglutinin | ECOD (v294.2) |
| B | Sybindin | e7thwB1 | A: beta barrels | X: Nuclear receptor ligand-binding domain | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Sybindin | ECOD (v294.2) |
| C | Sybindin | e7thwC1 | A: beta barrels | X: Nuclear receptor ligand-binding domain | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Sybindin | ECOD (v294.2) |
| D | Sybindin | e7thwD1 | A: beta barrels | X: Nuclear receptor ligand-binding domain | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Sybindin | ECOD (v294.2) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Putative OmpA-family membrane protein |
|
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR038522 | Type IV / VI secretion system, DotU superfamily | Homologous Superfamily | |
| IPR006665 | OmpA-like domain | Domain | |
| IPR017732 | Type IV / VI secretion system, DotU | Domain | |
| IPR050330 | Bacterial Outer Membrane Structural/Functional | Family | |
| IPR036737 | OmpA-like domain superfamily | Homologous Superfamily |














