7T0W

Complex of GABA-A synaptic receptor with autoimmune antibody Fab115


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ANeur_chan_LBDe7t0wA1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Nicotinic receptor ligand binding domain-like (From Topology)T: Nicotinic receptor ligand binding domain-likeF: Neur_chan_LBDECOD (1.6)
ANeur_chan_membe7t0wA2 A: alpha bundlesX: Neurotransmitter-gated ion-channel transmembrane pore (From Topology)H: Neurotransmitter-gated ion-channel transmembrane pore (From Topology)T: Neurotransmitter-gated ion-channel transmembrane poreF: Neur_chan_membECOD (1.6)
CNeur_chan_LBDe7t0wC2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Nicotinic receptor ligand binding domain-like (From Topology)T: Nicotinic receptor ligand binding domain-likeF: Neur_chan_LBDECOD (1.6)
CNeur_chan_membe7t0wC1 A: alpha bundlesX: Neurotransmitter-gated ion-channel transmembrane pore (From Topology)H: Neurotransmitter-gated ion-channel transmembrane pore (From Topology)T: Neurotransmitter-gated ion-channel transmembrane poreF: Neur_chan_membECOD (1.6)
BNeur_chan_LBDe7t0wB2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Nicotinic receptor ligand binding domain-like (From Topology)T: Nicotinic receptor ligand binding domain-likeF: Neur_chan_LBDECOD (1.6)
BNeur_chan_membe7t0wB1 A: alpha bundlesX: Neurotransmitter-gated ion-channel transmembrane pore (From Topology)H: Neurotransmitter-gated ion-channel transmembrane pore (From Topology)T: Neurotransmitter-gated ion-channel transmembrane poreF: Neur_chan_membECOD (1.6)
DNeur_chan_LBDe7t0wD1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Nicotinic receptor ligand binding domain-like (From Topology)T: Nicotinic receptor ligand binding domain-likeF: Neur_chan_LBDECOD (1.6)
DNeur_chan_membe7t0wD2 A: alpha bundlesX: Neurotransmitter-gated ion-channel transmembrane pore (From Topology)H: Neurotransmitter-gated ion-channel transmembrane pore (From Topology)T: Neurotransmitter-gated ion-channel transmembrane poreF: Neur_chan_membECOD (1.6)
ENeur_chan_LBDe7t0wE1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Nicotinic receptor ligand binding domain-like (From Topology)T: Nicotinic receptor ligand binding domain-likeF: Neur_chan_LBDECOD (1.6)
ENeur_chan_membe7t0wE2 A: alpha bundlesX: Neurotransmitter-gated ion-channel transmembrane pore (From Topology)H: Neurotransmitter-gated ion-channel transmembrane pore (From Topology)T: Neurotransmitter-gated ion-channel transmembrane poreF: Neur_chan_membECOD (1.6)
F [auth L2]V-set_3e7t0wL21 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_3ECOD (1.6)
I [auth L]V-set_3e7t0wL1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_3ECOD (1.6)
G [auth H]V-set_8e7t0wH1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_8ECOD (1.6)
H [auth H2]V-set_8e7t0wH21 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_8ECOD (1.6)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
F [auth L2],
I [auth L]
Light ChainIGLV1 Lambdagamma-aminobutyric acid receptor subunit alpha-1 | gamma-aminobutyric acid receptor subunit beta-2SAbDab (2024-10-25)
G [auth H],
H [auth H2]
-gamma-aminobutyric acid receptor subunit alpha-1 | gamma-aminobutyric acid receptor subunit beta-2undefined (undefined)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, C
PF02932Neurotransmitter-gated ion-channel transmembrane region (Neur_chan_memb)Neurotransmitter-gated ion-channel transmembrane region- Family
A, C
PF02931Neurotransmitter-gated ion-channel ligand binding domain (Neur_chan_LBD)Neurotransmitter-gated ion-channel ligand binding domain- Family
B, D
PF02932Neurotransmitter-gated ion-channel transmembrane region (Neur_chan_memb)Neurotransmitter-gated ion-channel transmembrane region- Family
B, D
PF02931Neurotransmitter-gated ion-channel ligand binding domain (Neur_chan_LBD)Neurotransmitter-gated ion-channel ligand binding domain- Family
PF02932Neurotransmitter-gated ion-channel transmembrane region (Neur_chan_memb)Neurotransmitter-gated ion-channel transmembrane region- Family
PF02931Neurotransmitter-gated ion-channel ligand binding domain (Neur_chan_LBD)Neurotransmitter-gated ion-channel ligand binding domain- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, C
Gamma-aminobutyric acid receptor subunit beta-2
B, D
Gamma-aminobutyric acid receptor subunit alpha-1
Gamma-aminobutyric acid receptor subunit gamma-2
F [auth L2],
I [auth L]
Fab115 light chain, IgG1---
G [auth H],
H [auth H2]
Fab115 Heavy Chain, IgG1---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, C
IPR006202Neurotransmitter-gated ion-channel ligand-binding domainDomain
A, C
IPR036719Neurotransmitter-gated ion-channel transmembrane domain superfamilyHomologous Superfamily
A, C
IPR006028Gamma-aminobutyric acid A receptor/Glycine receptor alphaFamily
A, C
IPR002289Gamma-aminobutyric-acid A receptor, beta subunitFamily
A, C
IPR006029Neurotransmitter-gated ion-channel transmembrane domainDomain
A, C
IPR036734Neurotransmitter-gated ion-channel ligand-binding domain superfamilyHomologous Superfamily
A, C
IPR018000Neurotransmitter-gated ion-channel, conserved siteConserved Site
A, C
IPR038050Neuronal acetylcholine receptorHomologous Superfamily
A, C
IPR006201Neurotransmitter-gated ion-channelFamily
B, D
IPR001390Gamma-aminobutyric-acid A receptor, alpha subunitFamily
B, D
IPR005431Gamma-aminobutyric-acid A receptor, alpha 1 subunitFamily
B, D
IPR006202Neurotransmitter-gated ion-channel ligand-binding domainDomain
B, D
IPR036719Neurotransmitter-gated ion-channel transmembrane domain superfamilyHomologous Superfamily
B, D
IPR006028Gamma-aminobutyric acid A receptor/Glycine receptor alphaFamily
B, D
IPR006029Neurotransmitter-gated ion-channel transmembrane domainDomain
B, D
IPR036734Neurotransmitter-gated ion-channel ligand-binding domain superfamilyHomologous Superfamily
B, D
IPR018000Neurotransmitter-gated ion-channel, conserved siteConserved Site
B, D
IPR038050Neuronal acetylcholine receptorHomologous Superfamily
B, D
IPR047024Gamma-aminobutyric acid receptor subunit alpha 1-6, transmembrane domainDomain
B, D
IPR047079Gamma-aminobutyric acid receptor subunit alpha-1, extracellular domainDomain
B, D
IPR006201Neurotransmitter-gated ion-channelFamily
IPR005437Gamma-aminobutyric acid receptor subunit gamma-1/4Family
IPR006202Neurotransmitter-gated ion-channel ligand-binding domainDomain
IPR036719Neurotransmitter-gated ion-channel transmembrane domain superfamilyHomologous Superfamily
IPR006028Gamma-aminobutyric acid A receptor/Glycine receptor alphaFamily
IPR005439Gamma-aminobutyric-acid A receptor, gamma 2 subunitFamily
IPR006029Neurotransmitter-gated ion-channel transmembrane domainDomain
IPR036734Neurotransmitter-gated ion-channel ligand-binding domain superfamilyHomologous Superfamily
IPR018000Neurotransmitter-gated ion-channel, conserved siteConserved Site
IPR038050Neuronal acetylcholine receptorHomologous Superfamily
IPR006201Neurotransmitter-gated ion-channelFamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A, C
PharosP47870
B, D
PharosP14867
PharosP18507