7SR8
Molecular mechanism of the the wake-promoting agent TAK-925
External Resource: Annotation
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Pharos: Disease Associations
- Membrane Protein Annotation: OPM
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: mpstruc
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C [auth G] | SCOP2B Superfamily | Transducin (heterotrimeric G protein), gamma chain | 8070798 | 3001771 | SCOP2B (2022-06-29) |
E [auth R] | SCOP2 Family | Class A (rhodopsin) G protein-coupled receptor-like | 8107805 | 4001858 | SCOP2 (2022-06-29) |
E [auth R] | SCOP2 Superfamily | G protein-coupled receptor-like | 8107806 | 3000473 | SCOP2 (2022-06-29) |
E [auth R] | SCOP2B Superfamily | G protein-coupled receptor-like | 8091148 | 3000473 | SCOP2B (2022-06-29) |
E [auth R] | SCOP2B Superfamily | G protein-coupled receptor-like | 8091148 | 3000473 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Ras | e7sr8A1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Ras | ECOD (1.6) |
D [auth E] | V-set | e7sr8E2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set | ECOD (1.6) |
D [auth E] | V-set_12 | e7sr8E1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_12 | ECOD (1.6) |
B | ANAPC4_WD40_3 | e7sr8B1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: ANAPC4_WD40_3 | ECOD (1.6) |
C [auth G] | G-gamma | e7sr8G1 | A: extended segments | X: Transducin (heterotrimeric G protein), gamma chain (From Topology) | H: Transducin (heterotrimeric G protein), gamma chain (From Topology) | T: Transducin (heterotrimeric G protein), gamma chain | F: G-gamma | ECOD (1.6) |
E [auth R] | 7tm_1_1 | e7sr8R1 | A: alpha bundles | X: Family A G protein-coupled receptor-like (From Topology) | H: Family A G protein-coupled receptor-like (From Topology) | T: Family A G protein-coupled receptor-like | F: 7tm_1_1 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat | |
C [auth G] | PF00631 | GGL domain (G-gamma) | GGL domain | G-protein gamma like domains (GGL) are found in the gamma subunit of the heterotrimeric G protein complex and in regulators of G protein signaling (RGS) proteins [1]. It is also found fused to an inactive Galpha in the Dictyostelium protein gbqA [2] ... | Domain |
E [auth R] | PF00001 | 7 transmembrane receptor (rhodopsin family) (7tm_1) | 7 transmembrane receptor (rhodopsin family) | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR019775 | WD40 repeat, conserved site | Conserved Site | |
IPR015943 | WD40/YVTN repeat-like-containing domain superfamily | Homologous Superfamily | |
IPR016346 | Guanine nucleotide-binding protein, beta subunit | Family | |
IPR036322 | WD40-repeat-containing domain superfamily | Homologous Superfamily | |
IPR001632 | G-protein, beta subunit | Domain | |
IPR001680 | WD40 repeat | Repeat | |
IPR020472 | G-protein beta WD-40 repeat | Repeat | |
C [auth G] | IPR015898 | G-protein gamma-like domain | Domain |
C [auth G] | IPR001770 | G-protein, gamma subunit | Family |
C [auth G] | IPR036284 | G-protein gamma-like domain superfamily | Homologous Superfamily |
E [auth R] | IPR000276 | G protein-coupled receptor, rhodopsin-like | Family |
E [auth R] | IPR004060 | Orexin receptor 2 | Family |
E [auth R] | IPR017452 | GPCR, rhodopsin-like, 7TM | Domain |
E [auth R] | IPR000204 | Orexin receptor family | Family |
Pharos: Disease Associations Pharos Homepage Annotation
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | Rhodopsin-like receptors and pumps | G-protein coupled receptors, family A |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
Chains | Resource Link | Group | Subgroup | Protein |
---|---|---|---|---|
mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | G Protein-Coupled Receptors: Class A | OX2 orexin receptor in complex with Gi protein and TAK-925 |