7SB2

Structure of the periplasmic domain of GldM from Capnocytophaga canimorsus


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF21601e7sb2A2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF21601ECOD (1.6)
APF12081e7sb2A1 A: alpha bundlesX: Type IX secretion system component GldM helical domain (From Topology)H: Type IX secretion system component GldM helical domain (From Topology)T: Type IX secretion system component GldM helical domainF: PF12081ECOD (1.6)
BPF21601e7sb2B2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF21601ECOD (1.6)
BPF12081e7sb2B1 A: alpha bundlesX: Type IX secretion system component GldM helical domain (From Topology)H: Type IX secretion system component GldM helical domain (From Topology)T: Type IX secretion system component GldM helical domainF: PF12081ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF12081GldM N-terminal domain (GldM_1st)GldM N-terminal domainThis domain is found in bacteria at the N-terminus of the GldM protein. This domain is typically between 169 to 182 amino acids in length. This domain has two completely conserved residues (Y and N) that may be functionally important. GldM, is named ...This domain is found in bacteria at the N-terminus of the GldM protein. This domain is typically between 169 to 182 amino acids in length. This domain has two completely conserved residues (Y and N) that may be functionally important. GldM, is named for the member from Cytophaga johnsonae (Flavobacterium johnsoniae), which is required for a type of rapid gliding motility found in certain members of the Bacteriodetes [1].
Domain
A, B
PF21601GldM second domain (GldM_2nd)GldM second domainThis immunoglobulin-like domain is found in bacteria in the GldM protein. GldM, is named for the member from Cytophaga johnsonae (Flavobacterium johnsoniae), which is required for a type of rapid gliding motility found in certain members of the Bact ...This immunoglobulin-like domain is found in bacteria in the GldM protein. GldM, is named for the member from Cytophaga johnsonae (Flavobacterium johnsoniae), which is required for a type of rapid gliding motility found in certain members of the Bacteriodetes [1].
Domain