Annotations: 7RUA

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Simibi-like P-loop NTPases	8106308	3002018	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Simibi-like P-loop NTPases	8106308	3002018	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	TPR-like	8090910	3001345	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	TPR-like	8090910	3001345	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF02374	e7ruaA1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: PF02374	ECOD (1.6)
B	PF02374	e7ruaB1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: PF02374	ECOD (1.6)
C	PF04190	e7ruaC1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: PF04190	ECOD (1.6)
F	PF04190	e7ruaF1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: PF04190	ECOD (1.6)
E	PF17840	e7ruaE1	A: alpha duplicates or obligate multimers	X: Get5 carboxyl domain (From Topology)	H: Get5 carboxyl domain (From Topology)	T: Get5 carboxyl domain	F: PF17840	ECOD (1.6)
H	PF17840	e7ruaH1	A: alpha duplicates or obligate multimers	X: Get5 carboxyl domain (From Topology)	H: Get5 carboxyl domain (From Topology)	T: Get5 carboxyl domain	F: PF17840	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF02374	Anion-transporting ATPase (ArsA_ATPase)	Anion-transporting ATPase	This Pfam family represents a conserved domain, which is sometimes repeated, in an anion-transporting ATPase. The ATPase is involved in the removal of arsenate, antimonite, and arsenate from the cell.	Domain
C, F	PF04190	Golgi to ER traffic protein 4 (GET4)	Golgi to ER traffic protein 4	-	Repeat
E, H	PF17840	Tethering Ubl4a to BAGS domain (Tugs)	Tethering Ubl4a to BAGS domain	This is the C-terminal domain of Ubiquitin-like protein 4A (Ubl4A), an orthologue of yeast Get5. In budding yeast, GET proteins directly mediate the insertion of newly synthesized TA proteins into endoplasmic reticulum membranes. Similarly, mammalian ...	This is the C-terminal domain of Ubiquitin-like protein 4A (Ubl4A), an orthologue of yeast Get5. In budding yeast, GET proteins directly mediate the insertion of newly synthesized TA proteins into endoplasmic reticulum membranes. Similarly, mammalian BAG6, Ubl4a, and SGTA make up a trimeric complex that binds TA proteins post-translationally and then loads them onto the cytosolic ATPase TRC40, which in turn targets them to the endoplasmic reticulum. Structural studies show that this C-terminal TUGS domain of Ubl4a is essential for BAG6 tethering. Given that BAG6 mediates oligomeric complex formation of Ubl4a, TRC35, and TRC40 (mammalian counterparts of Get5, Get4, and Get3, respectively), the C-terminal TUGS domain might be crucial for supporting BAG6-mediated Ubl4a-TRC35 complex formation in humans as an alternative to the direct Get5-Get4 interaction in yeast [1,2].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	ATPase GET3	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity ATP-dependent activity cation binding metal ion binding	protein localization membrane organization cellular localization establishment of protein localization establishment of protein localization to membrane localization within membrane protein localization to membrane endoplasmic reticulum organization establishment of localization cellular component organization localization organelle organization protein localization to organelle cellular macromolecule localization macromolecule localization protein localization membrane organization cellular localization establishment of protein localization establishment of protein localization to membrane localization within membrane protein localization to membrane endoplasmic reticulum organization establishment of localization cellular component organization localization organelle organization protein localization to organelle cellular macromolecule localization macromolecule localization cellular process cellular component organization or biogenesis protein insertion into membrane protein insertion into ER membrane endomembrane system organization protein targeting post-translational protein targeting to endoplasmic reticulum membrane protein targeting to membrane establishment of protein localization to organelle establishment of protein localization to endoplasmic reticulum protein localization to endoplasmic reticulum protein targeting to ER developmental process multicellular organismal process nervous system development cellular component biogenesis multicellular organism development cell junction organization cellular component assembly cell junction assembly anatomical structure development synapse organization synapse assembly system development	membrane-bounded organelle protein-containing complex intracellular anatomical structure cellular anatomical entity intracellular membrane-bounded organelle endomembrane system GET complex intracellular organelle organelle endoplasmic reticulum cytoplasm endoplasmic reticulum protein-containing complex
C, F	Golgi to ER traffic protein 4 homolog	protein binding binding protein-folding chaperone binding	organonitrogen compound catabolic process organonitrogen compound metabolic process catabolic process proteolysis involved in protein catabolic process primary metabolic process protein catabolic process macromolecule catabolic process organic substance metabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process proteolysis ubiquitin-dependent protein catabolic process metabolic process protein metabolic process organonitrogen compound catabolic process organonitrogen compound metabolic process catabolic process proteolysis involved in protein catabolic process primary metabolic process protein catabolic process macromolecule catabolic process organic substance metabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process proteolysis ubiquitin-dependent protein catabolic process metabolic process protein metabolic process macromolecule metabolic process organic substance catabolic process regulation of protein stability biological regulation regulation of biological quality cellular response to stimulus response to organic substance response to stimulus ERAD pathway cellular response to stress response to stress response to endoplasmic reticulum stress response to organonitrogen compound response to nitrogen compound proteasomal protein catabolic process response to chemical cellular process maintenance of unfolded protein protein localization membrane organization cellular localization establishment of protein localization establishment of protein localization to membrane localization within membrane protein localization to membrane endoplasmic reticulum organization establishment of localization cellular component organization localization organelle organization protein localization to organelle cellular macromolecule localization macromolecule localization cellular component organization or biogenesis protein insertion into membrane protein insertion into ER membrane endomembrane system organization tail-anchored membrane protein insertion into ER membrane protein targeting post-translational protein targeting to endoplasmic reticulum membrane protein targeting to membrane establishment of protein localization to organelle establishment of protein localization to endoplasmic reticulum protein localization to endoplasmic reticulum protein targeting to ER maintenance of protein location cytoplasmic sequestering of protein maintenance of location	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membrane-bounded organelle cellular anatomical entity nucleolus intracellular organelle lumen intracellular organelle organelle lumen organelle intracellular non-membrane-bounded organelle nuclear lumen non-membrane-bounded organelle membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membrane-bounded organelle cellular anatomical entity nucleolus intracellular organelle lumen intracellular organelle organelle lumen organelle intracellular non-membrane-bounded organelle nuclear lumen non-membrane-bounded organelle chromosome protein-containing complex BAT3 complex cytoplasm ER membrane insertion complex cytosol nucleoplasm
D, G	Large proline-rich protein BAG6	protein binding binding misfolded protein binding ubiquitin-specific protease binding enzyme binding protease binding polyubiquitin modification-dependent protein binding modification-dependent protein binding ubiquitin protein ligase binding ubiquitin-like protein ligase binding protein-containing complex binding proteasome binding identical protein binding signaling receptor binding protein binding binding misfolded protein binding ubiquitin-specific protease binding enzyme binding protease binding polyubiquitin modification-dependent protein binding modification-dependent protein binding ubiquitin protein ligase binding ubiquitin-like protein ligase binding protein-containing complex binding proteasome binding identical protein binding signaling receptor binding Hsp70 protein binding protein-folding chaperone binding heat shock protein binding ribonucleoprotein complex binding ribosome binding	developmental process multicellular organism development multicellular organismal process head development central nervous system development anatomical structure development animal organ development brain development nervous system development system development spermatogenesis sexual reproduction reproductive process multicellular organismal reproductive process developmental process multicellular organism development multicellular organismal process head development central nervous system development anatomical structure development animal organ development brain development nervous system development system development spermatogenesis sexual reproduction reproductive process multicellular organismal reproductive process developmental process involved in reproduction male gamete generation gamete generation regulation of protein stability biological regulation regulation of biological quality protein stabilization cellular response to stimulus response to organic substance catabolic process response to stimulus proteolysis involved in protein catabolic process macromolecule catabolic process ERAD pathway organic substance metabolic process cellular response to stress response to stress proteolysis protein metabolic process response to endoplasmic reticulum stress organonitrogen compound catabolic process organonitrogen compound metabolic process response to organonitrogen compound response to nitrogen compound proteasomal protein catabolic process primary metabolic process protein catabolic process response to chemical cellular process metabolic process macromolecule metabolic process organic substance catabolic process meiotic chromosome segregation synaptonemal complex assembly meiotic cell cycle process cellular component organization cellular component biogenesis cellular component assembly meiosis I meiotic nuclear division cellular component organization or biogenesis cell cycle synaptonemal complex organization chromosome segregation cell cycle process meiotic cell cycle organelle fission chromosome organization chromosome organization involved in meiotic cell cycle organelle organization nuclear division meiosis I cell cycle process homologous chromosome pairing at meiosis nuclear chromosome segregation homologous chromosome segregation protein localization membrane organization cellular localization establishment of protein localization establishment of protein localization to membrane localization within membrane tail-anchored membrane protein insertion into ER membrane protein localization to membrane endoplasmic reticulum organization establishment of localization localization protein localization to organelle cellular macromolecule localization macromolecule localization protein insertion into membrane protein insertion into ER membrane endomembrane system organization apoptotic process cell death programmed cell death negative regulation of proteolysis negative regulation of proteolysis involved in protein catabolic process negative regulation of biological process proteasome-mediated ubiquitin-dependent protein catabolic process regulation of ubiquitin-dependent protein catabolic process regulation of primary metabolic process negative regulation of protein catabolic process regulation of proteolysis involved in protein catabolic process regulation of proteolysis modification-dependent macromolecule catabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process negative regulation of ubiquitin-dependent protein catabolic process negative regulation of catabolic process regulation of biological process negative regulation of proteasomal ubiquitin-dependent protein catabolic process regulation of protein metabolic process negative regulation of metabolic process regulation of macromolecule metabolic process regulation of catabolic process regulation of proteasomal ubiquitin-dependent protein catabolic process modification-dependent protein catabolic process negative regulation of proteasomal protein catabolic process regulation of proteasomal protein catabolic process ubiquitin-dependent protein catabolic process regulation of metabolic process regulation of protein catabolic process immune response-regulating cell surface receptor signaling pathway regulation of cellular process signaling positive regulation of biological process cell communication positive regulation of response to stimulus immune response-activating signaling pathway immune response-regulating signaling pathway positive regulation of immune response regulation of immune system process signal transduction positive regulation of immune system process cell surface receptor signaling pathway immune response-activating cell surface receptor signaling pathway immune response regulation of response to stimulus immune system process regulation of immune response activation of immune response cell activation natural killer cell activation lymphocyte activation leukocyte activation maintenance of unfolded protein kidney development renal system development protein-DNA complex organization protein-containing complex organization chromatin organization cellular developmental process cell differentiation negative regulation of programmed cell death regulation of apoptotic process regulation of programmed cell death negative regulation of apoptotic process negative regulation of cellular process tube development respiratory tube development lung development respiratory system development protein targeting post-translational protein targeting to endoplasmic reticulum membrane protein targeting to membrane establishment of protein localization to organelle establishment of protein localization to endoplasmic reticulum protein localization to endoplasmic reticulum protein targeting to ER endoplasmic reticulum stress-induced pre-emptive quality control intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress intracellular signal transduction apoptotic signaling pathway intrinsic apoptotic signaling pathway signal transduction by p53 class mediator intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator DNA damage response intrinsic apoptotic signaling pathway by p53 class mediator intrinsic apoptotic signaling pathway in response to DNA damage regulation of embryonic development regulation of multicellular organismal development regulation of developmental process embryo development regulation of multicellular organismal process peptidyl-lysine acetylation peptidyl-lysine modification protein acylation protein acetylation internal peptidyl-lysine acetylation macromolecule modification peptidyl-amino acid modification protein modification process internal protein amino acid acetylation positive regulation of proteasomal protein catabolic process regulation of cellular response to stress positive regulation of metabolic process positive regulation of macromolecule metabolic process regulation of ERAD pathway positive regulation of protein catabolic process positive regulation of proteolysis positive regulation of ERAD pathway positive regulation of protein metabolic process regulation of response to endoplasmic reticulum stress positive regulation of response to endoplasmic reticulum stress regulation of response to stress positive regulation of cellular process positive regulation of proteolysis involved in protein catabolic process positive regulation of catabolic process	membrane cellular anatomical entity extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region organelle extracellular space vesicle extracellular membrane-bounded organelle intracellular anatomical structure cytoplasm cytosol membrane cellular anatomical entity extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region organelle extracellular space vesicle extracellular membrane-bounded organelle intracellular anatomical structure cytoplasm cytosol intracellular organelle intracellular membrane-bounded organelle nucleus membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen protein-containing complex BAT3 complex ER membrane insertion complex
E, H	Ubiquitin-like protein 4A	protein binding binding protein-folding chaperone binding aminoacyltransferase activity ubiquitin-like protein transferase activity catalytic activity, acting on a protein acyltransferase activity transferase activity catalytic activity	organonitrogen compound catabolic process organonitrogen compound metabolic process catabolic process proteolysis involved in protein catabolic process primary metabolic process protein catabolic process macromolecule catabolic process organic substance metabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process proteolysis ubiquitin-dependent protein catabolic process metabolic process protein metabolic process organonitrogen compound catabolic process organonitrogen compound metabolic process catabolic process proteolysis involved in protein catabolic process primary metabolic process protein catabolic process macromolecule catabolic process organic substance metabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process proteolysis ubiquitin-dependent protein catabolic process metabolic process protein metabolic process macromolecule metabolic process organic substance catabolic process regulation of protein stability biological regulation regulation of biological quality macromolecule modification protein modification process protein localization membrane organization cellular localization establishment of protein localization establishment of protein localization to membrane localization within membrane tail-anchored membrane protein insertion into ER membrane protein localization to membrane endoplasmic reticulum organization establishment of localization cellular component organization localization organelle organization protein localization to organelle cellular macromolecule localization macromolecule localization cellular process cellular component organization or biogenesis protein insertion into membrane protein insertion into ER membrane endomembrane system organization protein targeting post-translational protein targeting to endoplasmic reticulum membrane protein targeting to membrane establishment of protein localization to organelle establishment of protein localization to endoplasmic reticulum protein localization to endoplasmic reticulum protein targeting to ER	membrane cellular anatomical entity protein-containing complex intracellular anatomical structure BAT3 complex cytoplasm ER membrane insertion complex cytosol membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle membrane cellular anatomical entity protein-containing complex intracellular anatomical structure BAT3 complex cytoplasm ER membrane insertion complex cytosol membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle nucleoplasm organelle lumen organelle nuclear lumen

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR025723	Anion-transporting ATPase-like domain	Domain
A, B	IPR027542	Arsenical pump ATPase, ArsA/GET3, eukaryotic	Family
A, B	IPR016300	Arsenical pump ATPase, ArsA/GET3	Family
A, B	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
C, F	IPR011990	Tetratricopeptide-like helical domain superfamily	Homologous Superfamily
C, F	IPR007317	Golgi to ER traffic protein 4	Family
D, G	IPR019954	Ubiquitin conserved site	Conserved Site
D, G	IPR000626	Ubiquitin-like domain	Domain
D, G	IPR048926	Bag6, BAG-similar domain	Domain
D, G	IPR021925	Large proline-rich protein BAG6	Domain
D, G	IPR029071	Ubiquitin-like domain superfamily	Homologous Superfamily
E, H	IPR019954	Ubiquitin conserved site	Conserved Site
E, H	IPR000626	Ubiquitin-like domain	Domain
E, H	IPR019956	Ubiquitin domain	Domain
E, H	IPR029071	Ubiquitin-like domain superfamily	Homologous Superfamily
E, H	IPR044724	UBL4A-like, ubiquitin-like domain	Domain
E, H	IPR041421	Ubl4, C-terminal TUGS domain	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
C, F	Pharos: Q7L5D6	atrial fibrillation peripheral nervous system disease peripheral neuropathy
D, G	Pharos: P46379	rheumatoid arthritis astrocytic tumor Crohn disease hypertensive disorder lung carcinoma membranous glomerulonephritis ovarian cancer squamous cell lung carcinoma autism spectrum disorder cutaneous lupus erythematosus laryngeal squamous cell carcinoma malignant mesothelioma myositis psoriatic arthritis systemic lupus erythematosus rheumatoid arthritis astrocytic tumor Crohn disease hypertensive disorder lung carcinoma membranous glomerulonephritis ovarian cancer squamous cell lung carcinoma autism spectrum disorder cutaneous lupus erythematosus laryngeal squamous cell carcinoma malignant mesothelioma myositis psoriatic arthritis systemic lupus erythematosus cancer Hashimoto thyroiditis lung adenocarcinoma medulloblastoma osteosarcoma
E, H	Pharos: P11441	malignant mesothelioma psoriasis

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.