7R5K
Human nuclear pore complex (constricted)
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
P [auth A0] | SCOP2B Superfamily | Scaffolding nucleoporins | 8090313 | 3002255 | SCOP2B (2021-05-27) |
Q [auth A1] | SCOP2B Superfamily | Scaffolding nucleoporins | 8090313 | 3002255 | SCOP2B (2021-05-27) |
R [auth A2] | SCOP2B Superfamily | Scaffolding nucleoporins | 8090313 | 3002255 | SCOP2B (2021-05-27) |
S [auth A3] | SCOP2B Superfamily | Scaffolding nucleoporins | 8090313 | 3002255 | SCOP2B (2021-05-27) |
T [auth A4] | SCOP2B Superfamily | Scaffolding nucleoporins | 8090313 | 3002255 | SCOP2B (2021-05-27) |
U [auth A5] | SCOP2B Superfamily | Scaffolding nucleoporins | 8090313 | 3002255 | SCOP2B (2021-05-27) |
V [auth A6] | SCOP2B Superfamily | Scaffolding nucleoporins | 8090313 | 3002255 | SCOP2B (2021-05-27) |
W [auth B0] | SCOP2B Superfamily | Scaffolding nucleoporins | 8053964 | 3002255 | SCOP2B (2021-05-27) |
X [auth B1] | SCOP2B Superfamily | Scaffolding nucleoporins | 8053964 | 3002255 | SCOP2B (2021-05-27) |
DA [auth D0] | SCOP2B Superfamily | Scaffolding nucleoporins | 8090958 | 3002255 | SCOP2B (2021-05-27) |
DA [auth D0] | SCOP2B Superfamily | Nucleoporin beta-propeller domain | 8090969 | 3000456 | SCOP2B (2021-05-27) |
EA [auth D1] | SCOP2B Superfamily | Nucleoporin beta-propeller domain | 8090969 | 3000456 | SCOP2B (2021-05-27) |
EA [auth D1] | SCOP2B Superfamily | Scaffolding nucleoporins | 8090958 | 3002255 | SCOP2B (2021-05-27) |
FA [auth D2] | SCOP2B Superfamily | Scaffolding nucleoporins | 8090958 | 3002255 | SCOP2B (2021-05-27) |
FA [auth D2] | SCOP2B Superfamily | Nucleoporin beta-propeller domain | 8090969 | 3000456 | SCOP2B (2021-05-27) |
GA [auth D3] | SCOP2B Superfamily | Scaffolding nucleoporins | 8090958 | 3002255 | SCOP2B (2021-05-27) |
GA [auth D3] | SCOP2B Superfamily | Nucleoporin beta-propeller domain | 8090969 | 3000456 | SCOP2B (2021-05-27) |
HA [auth D4] | SCOP2B Superfamily | Nucleoporin beta-propeller domain | 8090969 | 3000456 | SCOP2B (2021-05-27) |
HA [auth D4] | SCOP2B Superfamily | Scaffolding nucleoporins | 8090958 | 3002255 | SCOP2B (2021-05-27) |
IA [auth D5] | SCOP2B Superfamily | Nucleoporin beta-propeller domain | 8090969 | 3000456 | SCOP2B (2021-05-27) |
IA [auth D5] | SCOP2B Superfamily | Scaffolding nucleoporins | 8090958 | 3002255 | SCOP2B (2021-05-27) |
LA [auth F0] | SCOP2B Superfamily | RNA-binding domain RBD | 8087390 | 3000110 | SCOP2B (2021-05-27) |
MA [auth F1] | SCOP2B Superfamily | RNA-binding domain RBD | 8087390 | 3000110 | SCOP2B (2021-05-27) |
NA [auth F2] | SCOP2B Superfamily | RNA-binding domain RBD | 8087390 | 3000110 | SCOP2B (2021-05-27) |
OA [auth F3] | SCOP2B Superfamily | RNA-binding domain RBD | 8087390 | 3000110 | SCOP2B (2021-05-27) |
TA [auth I0] | SCOP2B Superfamily | Nup58-like | 8053256 | 3002169 | SCOP2B (2021-05-27) |
UA [auth I1] | SCOP2B Superfamily | Nup58-like | 8053256 | 3002169 | SCOP2B (2021-05-27) |
VA [auth I2] | SCOP2B Superfamily | Nup58-like | 8053256 | 3002169 | SCOP2B (2021-05-27) |
WA [auth I3] | SCOP2B Superfamily | Nup58-like | 8053256 | 3002169 | SCOP2B (2021-05-27) |
AB [auth J3] | SCOP2B Superfamily | Nup62-like | 8053268 | 3002170 | SCOP2B (2021-05-27) |
BB [auth J4] | SCOP2B Superfamily | Nup62-like | 8053268 | 3002170 | SCOP2B (2021-05-27) |
XA [auth J0] | SCOP2B Superfamily | Nup62-like | 8053268 | 3002170 | SCOP2B (2021-05-27) |
YA [auth J1] | SCOP2B Superfamily | Nup62-like | 8053268 | 3002170 | SCOP2B (2021-05-27) |
ZA [auth J2] | SCOP2B Superfamily | Nup62-like | 8053268 | 3002170 | SCOP2B (2021-05-27) |
CB [auth K0] | SCOP2B Superfamily | Nucleoporin beta-propeller domain | 8043971 | 3000456 | SCOP2B (2021-05-27) |
CB [auth K0] | SCOP2B Superfamily | Scaffolding nucleoporins | 8090957 | 3002255 | SCOP2B (2021-05-27) |
EB [auth K2] | SCOP2B Superfamily | Nucleoporin beta-propeller domain | 8043971 | 3000456 | SCOP2B (2021-05-27) |
EB [auth K2] | SCOP2B Superfamily | Scaffolding nucleoporins | 8090957 | 3002255 | SCOP2B (2021-05-27) |
FB [auth K3] | SCOP2B Superfamily | Scaffolding nucleoporins | 8090957 | 3002255 | SCOP2B (2021-05-27) |
FB [auth K3] | SCOP2B Superfamily | Nucleoporin beta-propeller domain | 8043971 | 3000456 | SCOP2B (2021-05-27) |
DB [auth K1] | SCOP2B Superfamily | Nucleoporin beta-propeller domain | 8043971 | 3000456 | SCOP2B (2021-05-27) |
DB [auth K1] | SCOP2B Superfamily | Scaffolding nucleoporins | 8090957 | 3002255 | SCOP2B (2021-05-27) |
KB [auth M0] | SCOP2B Superfamily | Coat and nuclear envelope proteins | 8054128 | 3002276 | SCOP2B (2021-05-27) |
LB [auth M1] | SCOP2B Superfamily | Coat and nuclear envelope proteins | 8054128 | 3002276 | SCOP2B (2021-05-27) |
MB [auth M2] | SCOP2B Superfamily | Coat and nuclear envelope proteins | 8054128 | 3002276 | SCOP2B (2021-05-27) |
NB [auth M3] | SCOP2B Superfamily | Coat and nuclear envelope proteins | 8054128 | 3002276 | SCOP2B (2021-05-27) |
WB [auth P0] | SCOP2B Superfamily | Coat and nuclear envelope proteins | 8054125 | 3002276 | SCOP2B (2021-05-27) |
XB [auth P1] | SCOP2B Superfamily | Coat and nuclear envelope proteins | 8054125 | 3002276 | SCOP2B (2021-05-27) |
YB [auth P2] | SCOP2B Superfamily | Coat and nuclear envelope proteins | 8054125 | 3002276 | SCOP2B (2021-05-27) |
ZB [auth P3] | SCOP2B Superfamily | Coat and nuclear envelope proteins | 8054125 | 3002276 | SCOP2B (2021-05-27) |
EC [auth R0] | SCOP2B Superfamily | Scaffolding nucleoporins | 8090984 | 3002255 | SCOP2B (2021-05-27) |
EC [auth R0] | SCOP2B Superfamily | Nucleoporin beta-propeller domain | 8090976 | 3000456 | SCOP2B (2021-05-27) |
FC [auth R1] | SCOP2B Superfamily | Scaffolding nucleoporins | 8090984 | 3002255 | SCOP2B (2021-05-27) |
FC [auth R1] | SCOP2B Superfamily | Nucleoporin beta-propeller domain | 8090976 | 3000456 | SCOP2B (2021-05-27) |
GC [auth R2] | SCOP2B Superfamily | Nucleoporin beta-propeller domain | 8090976 | 3000456 | SCOP2B (2021-05-27) |
GC [auth R2] | SCOP2B Superfamily | Scaffolding nucleoporins | 8090984 | 3002255 | SCOP2B (2021-05-27) |
HC [auth R3] | SCOP2B Superfamily | Nucleoporin beta-propeller domain | 8090976 | 3000456 | SCOP2B (2021-05-27) |
HC [auth R3] | SCOP2B Superfamily | Scaffolding nucleoporins | 8090984 | 3002255 | SCOP2B (2021-05-27) |
OC [auth U0] | SCOP2B Superfamily | ZU5 domain-like | 8091407 | 3002026 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
N [auth 40] | F_UNCLASSIFIED | e7r5k401 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 8-bladed | F: F_UNCLASSIFIED | ECOD (1.6) |
O [auth 41] | F_UNCLASSIFIED | e7r5k411 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 8-bladed | F: F_UNCLASSIFIED | ECOD (1.6) |
DA [auth D0] | PF08801 | e7r5kD02 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: PF08801 | ECOD (1.6) |
DA [auth D0] | PF03177 | e7r5kD01 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains (From Topology) | T: Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains | F: PF03177 | ECOD (1.6) |
EA [auth D1] | PF08801 | e7r5kD12 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: PF08801 | ECOD (1.6) |
EA [auth D1] | PF03177 | e7r5kD11 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains (From Topology) | T: Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains | F: PF03177 | ECOD (1.6) |
FA [auth D2] | PF08801 | e7r5kD22 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: PF08801 | ECOD (1.6) |
FA [auth D2] | PF03177 | e7r5kD21 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains (From Topology) | T: Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains | F: PF03177 | ECOD (1.6) |
GA [auth D3] | PF08801 | e7r5kD32 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: PF08801 | ECOD (1.6) |
GA [auth D3] | PF03177 | e7r5kD31 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains (From Topology) | T: Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains | F: PF03177 | ECOD (1.6) |
HA [auth D4] | PF08801 | e7r5kD42 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: PF08801 | ECOD (1.6) |
HA [auth D4] | PF03177 | e7r5kD41 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains (From Topology) | T: Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains | F: PF03177 | ECOD (1.6) |
IA [auth D5] | PF08801 | e7r5kD52 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: PF08801 | ECOD (1.6) |
IA [auth D5] | PF03177 | e7r5kD51 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains (From Topology) | T: Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains | F: PF03177 | ECOD (1.6) |
CB [auth K0] | F_UNCLASSIFIED | e7r5kK02 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: F_UNCLASSIFIED | ECOD (1.6) |
CB [auth K0] | PF03177 | e7r5kK01 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains (From Topology) | T: Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains | F: PF03177 | ECOD (1.6) |
EB [auth K2] | F_UNCLASSIFIED | e7r5kK22 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: F_UNCLASSIFIED | ECOD (1.6) |
EB [auth K2] | PF03177 | e7r5kK21 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains (From Topology) | T: Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains | F: PF03177 | ECOD (1.6) |
FB [auth K3] | F_UNCLASSIFIED | e7r5kK32 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: F_UNCLASSIFIED | ECOD (1.6) |
FB [auth K3] | PF03177 | e7r5kK31 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains (From Topology) | T: Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains | F: PF03177 | ECOD (1.6) |
DB [auth K1] | F_UNCLASSIFIED | e7r5kK12 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: F_UNCLASSIFIED | ECOD (1.6) |
DB [auth K1] | PF03177 | e7r5kK11 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains (From Topology) | T: Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains | F: PF03177 | ECOD (1.6) |
SB [auth O0] | PF00400 | e7r5kO01 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: PF00400 | ECOD (1.6) |
TB [auth O1] | PF00400 | e7r5kO11 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: PF00400 | ECOD (1.6) |
UB [auth O2] | PF00400 | e7r5kO21 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: PF00400 | ECOD (1.6) |
VB [auth O3] | PF00400 | e7r5kO31 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: PF00400 | ECOD (1.6) |
WB [auth P0] | PF07575 | e7r5kP01 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain (From Topology) | T: Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain | F: PF07575 | ECOD (1.6) |
XB [auth P1] | PF07575 | e7r5kP11 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain (From Topology) | T: Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain | F: PF07575 | ECOD (1.6) |
YB [auth P2] | PF07575 | e7r5kP21 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain (From Topology) | T: Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain | F: PF07575 | ECOD (1.6) |
ZB [auth P3] | PF07575 | e7r5kP31 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain (From Topology) | T: Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain | F: PF07575 | ECOD (1.6) |
AC [auth Q0] | PF00400 | e7r5kQ01 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: PF00400 | ECOD (1.6) |
BC [auth Q1] | PF00400 | e7r5kQ11 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: PF00400 | ECOD (1.6) |
CC [auth Q2] | PF00400 | e7r5kQ21 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: PF00400 | ECOD (1.6) |
DC [auth Q3] | PF00400 | e7r5kQ31 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: PF00400 | ECOD (1.6) |
IC [auth S0] | PF00400 | e7r5kS01 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: PF00400 | ECOD (1.6) |
JC [auth S1] | PF00400 | e7r5kS11 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: PF00400 | ECOD (1.6) |
KC [auth S2] | PF00400 | e7r5kS21 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: PF00400 | ECOD (1.6) |
LC [auth S3] | PF00400 | e7r5kS31 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: PF00400 | ECOD (1.6) |
OC [auth U0] | PF04096 | e7r5kU01 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: ZU5/Nup98-C/GAIN-B autoproteolytic domain-related (From Topology) | T: ZU5/Nup98-C/GAIN-B autoproteolytic domain-related | F: PF04096 | ECOD (1.6) |
OB [auth N0] | PF00400 | e7r5kN01 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: PF00400 | ECOD (1.6) |
PB [auth N1] | PF00400 | e7r5kN11 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: PF00400 | ECOD (1.6) |
QB [auth N2] | PF00400 | e7r5kN21 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: PF00400 | ECOD (1.6) |
RB [auth N3] | PF00400 | e7r5kN31 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: PF00400 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF22962 | NUP210 Ig-like domain 7 (NUP210_Ig7) | NUP210 Ig-like domain 7 | This domain is found in the homologues of Nuclear pore membrane glycoprotein 210 (NUP210). NUP210 is essential for nuclear pore assembly and fusion, nuclear pore spacing, as well as for its structural integrity. NUP210 is composed of multiple immunog ... | Domain | |
PF22957 | NUP210 Ig-like domain (NUP210_Ig) | NUP210 Ig-like domain | This domain is found in the homologues of Nuclear pore membrane glycoprotein 210 (NUP210). NUP210 is essential for nuclear pore assembly and fusion, nuclear pore spacing, as well as for its structural integrity. NUP210 is composed of multiple immunog ... | Domain | |
PF22967 | NUP210 Ig-like domain 1 (NUP210_Ig1) | NUP210 Ig-like domain 1 | This domain is found in the homologues of human Nuclear pore membrane glycoprotein 210 (NUP210). NUP210 is essential for nuclear pore assembly and fusion, nuclear pore spacing, as well as for its structural integrity. NUP210 is composed of multiple i ... | Domain | |
PF22959 | NUP210 Ig-like domain 15 (NUP210_Ig15) | NUP210 Ig-like domain 15 | This domain is found in the homologues of Nuclear pore membrane glycoprotein 210 (NUP210). NUP210 is essential for nuclear pore assembly and fusion, nuclear pore spacing, as well as for its structural integrity. NUP210 is composed of multiple immunog ... | Domain | |
PF22969 | NUP210 Ig-like domain 2 (NUP210_Ig2) | NUP210 Ig-like domain 2 | This domain is found in the homologues of human Nuclear pore membrane glycoprotein 210 (NUP210). NUP210 is essential for nuclear pore assembly and fusion, nuclear pore spacing, as well as for its structural integrity. NUP210 is composed of multiple i ... | Domain | |
PF02368 | Bacterial Ig-like domain (group 2) (Big_2) | Bacterial Ig-like domain (group 2) | This family consists of bacterial domains with an Ig-like fold. Members of this family are found in bacterial and phage surface proteins such as intimins. | Domain | |
PF22963 | NUP210 Ig-like domain 3 (NUP210_Ig3) | NUP210 Ig-like domain 3 | This domain is found in the homologues of human Nuclear pore membrane glycoprotein 210 (NUP210). NUP210 is essential for nuclear pore assembly and fusion, nuclear pore spacing, as well as for its structural integrity. NUP210 is composed of multiple i ... | Domain | |
N [auth 40], O [auth 41] | PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat |
PF04097 | Nup93/Nic96 (Nic96) | Nup93/Nic96 | - | Repeat | |
W [auth B0], X [auth B1] | PF10487 | Nucleoporin Nup188, N-terminal (Nup188_N) | Nucleoporin Nup188, N-terminal | - | Repeat |
W [auth B0], X [auth B1] | PF21093 | Nucleoporin Nup188, N-terminal subdomain III (Nup188_N-subdom_III) | Nucleoporin Nup188, N-terminal subdomain III | - | Repeat |
W [auth B0], X [auth B1] | PF21094 | Nup188 SH3-like domain (Nup188_SH3-like) | Nup188 SH3-like domain | Nup188 is one of the many peptides that make up the nucleoporin complex (NPC), and is found across eukaryotes [1,2]. The Nup188 subcomplex (Nic96p-Nup188p-Nup192p-Pom152p) is one of at least six that make up the NPC, and as such is symmetrically loca ... | Domain |
AA [auth C2], BA [auth C3], CA [auth C4], Y [auth C0], Z [auth C1] | PF11894 | Nuclear pore complex scaffold, nucleoporins 186/192/205 (Nup192) | Nuclear pore complex scaffold, nucleoporins 186/192/205 | - | Repeat |
PF03177 | Non-repetitive/WGA-negative nucleoporin C-terminal (Nucleoporin_C) | Non-repetitive/WGA-negative nucleoporin C-terminal | - | Repeat | |
PF08801 | Nup133 N terminal like (Nucleoporin_N) | Nup133 N terminal like | - | Repeat | |
JA [auth E0], KA [auth E1] | PF09531 | Nucleoporin protein Ndc1-Nup (Ndc1_Nup) | Nucleoporin protein Ndc1-Nup | - | Family |
LA [auth F0], MA [auth F1], NA [auth F2], OA [auth F3] | PF05172 | Nup53/35/40-type RNA recognition motif (Nup35_RRM) | Nup53/35/40-type RNA recognition motif | Members of this family belong to the nucleor pore complex, NPC, the only gateway between the nucleus and the cytoplasm. The NPC consists of several subcomplexes each one of which is made up of multiple copies of several individual Nup, Nic or Sec pro ... | Domain |
PA [auth H0], QA [auth H1], RA [auth H2], SA [auth H3] | PF18437 | Nup54 C-terminal interacting domain (Nup54_C) | Nup54 C-terminal interacting domain | The mammalian nuclear pore complex (NPC) conducts nucleocytoplasmic transport and contains multiple copies of nucleoporins (nups). This is the C-terminal interacting domain found on Nup54. Nup45 is a splice variant of Nup58 with an identical alpha-he ... | Domain |
PA [auth H0], QA [auth H1], RA [auth H2], SA [auth H3] | PF13874 | Nucleoporin complex subunit 54 (Nup54) | Nucleoporin complex subunit 54 | This is the human Nup54 subunit of the nucleoporin complex, equivalent to Nup57 of yeast. Nup54, Nup58 and Nup62 all have similar affinities for importin-beta. It seems likely that they are the only FG-repeat nucleoporins of the central channel, and ... | Domain |
CB [auth K0], DB [auth K1], EB [auth K2], FB [auth K3] | PF03177 | Non-repetitive/WGA-negative nucleoporin C-terminal (Nucleoporin_C) | Non-repetitive/WGA-negative nucleoporin C-terminal | - | Repeat |
GB [auth L0], HB [auth L1], IB [auth L2], JB [auth L3] | PF04121 | Nuclear pore protein 84 / 107 (Nup84_Nup100) | Nuclear pore protein 84 / 107 | - | Family |
KB [auth M0], LB [auth M1], MB [auth M2], NB [auth M3] | PF12110 | Nuclear protein 96 (Nup96) | Nuclear protein 96 | Nup96 (often known by the name of its yeast homolog Nup145C) is part of the Nup84 heptameric complex in the nuclear pore complex. Nup96 complexes with Sec13 in the middle of the heptamer. The function of the heptamer is to coat the curvature of the n ... | Domain |
SB [auth O0], TB [auth O1], UB [auth O2], VB [auth O3] | PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat |
WB [auth P0], XB [auth P1], YB [auth P2], ZB [auth P3] | PF07575 | Nup85 Nucleoporin (Nucleopor_Nup85) | Nup85 Nucleoporin | - | Family |
AC [auth Q0], BC [auth Q1], CC [auth Q2], DC [auth Q3] | PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat |
EC [auth R0], FC [auth R1], GC [auth R2], HC [auth R3] | PF11715 | Nucleoporin Nup120/160 (Nup160) | Nucleoporin Nup120/160 | - | Repeat |
IC [auth S0], JC [auth S1], KC [auth S2], LC [auth S3] | PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat |
MC [auth T0], NC [auth T1] | PF13934 | Nuclear pore complex assembly (ELYS) | Nuclear pore complex assembly | - | Family |
PF04096 | Nucleoporin autopeptidase (Nucleoporin2) | Nucleoporin autopeptidase | - | Family | |
WC [auth W0] | PF10168 | Nuclear pore component (Nup88) | Nuclear pore component | - | Repeat |
OB [auth N0], PB [auth N1], QB [auth N2], RB [auth N3] | PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat |