7QUP | pdb_00007qup

D. melanogaster 13-protofilament microtubule


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AA [auth 2B]Ribosomal_L30e7qup2B1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
B [auth 10B]Ribosomal_L30e7qup10B1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
CA [auth 2D]Ribosomal_L30e7qup2D1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
D [auth 10D]Ribosomal_L30e7qup10D1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
EB [auth 8B]Ribosomal_L30e7qup8B1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
G [auth 11B]Ribosomal_L30e7qup11B1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
HA [auth 3D]Ribosomal_L30e7qup3D1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
I [auth 11D]Ribosomal_L30e7qup11D1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
JB [auth 9B]Ribosomal_L30e7qup9B1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
L [auth 12B]Ribosomal_L30e7qup12B1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
LB [auth 9D]Ribosomal_L30e7qup9D1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
N [auth 12D]Ribosomal_L30e7qup12D1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
PA [auth 5B]Ribosomal_L30e7qup5B1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
Q [auth 13B]Ribosomal_L30e7qup13B1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
RA [auth 5D]Ribosomal_L30e7qup5D1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
S [auth 13D]Ribosomal_L30e7qup13D1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
UA [auth 6B]Ribosomal_L30e7qup6B1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
V [auth 1B]Ribosomal_L30e7qup1B1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
WA [auth 6D]Ribosomal_L30e7qup6D1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
X [auth 1D]Ribosomal_L30e7qup1D1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
ZA [auth 7B]Ribosomal_L30e7qup7B1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
MA [auth 4D]Ribosomal_L30e7qup4D1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
KA [auth 4B]Ribosomal_L30e7qup4B1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
GB [auth 8D]Ribosomal_L30e7qup8D1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
FA [auth 3B]Ribosomal_L30e7qup3B1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
BB [auth 7D]Ribosomal_L30e7qup7D1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
A [auth 10A]Ribosomal_L30e7qup10A1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
BA [auth 2C]Ribosomal_L30e7qup2C1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
C [auth 10C]Ribosomal_L30e7qup10C1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
CB [auth 7E]Ribosomal_L30e7qup7E1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
DA [auth 2E]Ribosomal_L30e7qup2E1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
DB [auth 8A]Ribosomal_L30e7qup8A1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
E [auth 10E]Ribosomal_L30e7qup10E1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
EA [auth 3A]Ribosomal_L30e7qup3A1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
F [auth 11A]Ribosomal_L30e7qup11A1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
GA [auth 3C]Ribosomal_L30e7qup3C1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
H [auth 11C]Ribosomal_L30e7qup11C1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
IA [auth 3E]Ribosomal_L30e7qup3E1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
IB [auth 9A]Ribosomal_L30e7qup9A1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
J [auth 11E]Ribosomal_L30e7qup11E1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
JA [auth 4A]Ribosomal_L30e7qup4A1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
LA [auth 4C]Ribosomal_L30e7qup4C1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
M [auth 12C]Ribosomal_L30e7qup12C1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
MB [auth 9E]Ribosomal_L30e7qup9E1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
NA [auth 4E]Ribosomal_L30e7qup4E1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
O [auth 12E]Ribosomal_L30e7qup12E1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
OA [auth 5A]Ribosomal_L30e7qup5A1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
P [auth 13A]Ribosomal_L30e7qup13A1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
QA [auth 5C]Ribosomal_L30e7qup5C1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
SA [auth 5E]Ribosomal_L30e7qup5E1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
T [auth 13E]Ribosomal_L30e7qup13E1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
TA [auth 6A]Ribosomal_L30e7qup6A1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
U [auth 1A]Ribosomal_L30e7qup1A1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
Y [auth 1E]Ribosomal_L30e7qup1E1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
Z [auth 2A]Ribosomal_L30e7qup2A1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
YA [auth 7A]Ribosomal_L30e7qup7A1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
XA [auth 6E]Ribosomal_L30e7qup6E1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
W [auth 1C]Ribosomal_L30e7qup1C1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
VA [auth 6C]Ribosomal_L30e7qup6C1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
R [auth 13C]Ribosomal_L30e7qup13C1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
KB [auth 9C]Ribosomal_L30e7qup9C1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
K [auth 12A]Ribosomal_L30e7qup12A1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
HB [auth 8E]Ribosomal_L30e7qup8E1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
FB [auth 8C]Ribosomal_L30e7qup8C1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)
AB [auth 7C]Ribosomal_L30e7qup7C1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00091Tubulin/FtsZ family, GTPase domain (Tubulin)Tubulin/FtsZ family, GTPase domainThis family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ...This family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tubulin is the major component of microtubules.
Domain
PF03953Tubulin C-terminal domain (Tubulin_C)Tubulin C-terminal domainThis family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tub ...This family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tubulin is the major component of microtubules. (The FtsZ GTPases have been split into their won family).
Domain
PF00091Tubulin/FtsZ family, GTPase domain (Tubulin)Tubulin/FtsZ family, GTPase domainThis family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ...This family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tubulin is the major component of microtubules.
Domain
PF03953Tubulin C-terminal domain (Tubulin_C)Tubulin C-terminal domainThis family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tub ...This family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tubulin is the major component of microtubules. (The FtsZ GTPases have been split into their won family).
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Tubulin beta-1 chain
Tubulin alpha-1 chain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR003008Tubulin/FtsZ, GTPase domainDomain
IPR008280Tubulin/FtsZ, C-terminalHomologous Superfamily
IPR037103Tubulin/FtsZ-like, C-terminal domainHomologous Superfamily
IPR017975Tubulin, conserved siteConserved Site
IPR000217TubulinFamily
IPR023123Tubulin, C-terminalHomologous Superfamily
IPR002453Beta tubulinFamily
IPR013838Beta tubulin, autoregulation binding siteBinding Site
IPR018316Tubulin/FtsZ, 2-layer sandwich domainDomain
IPR036525Tubulin/FtsZ, GTPase domain superfamilyHomologous Superfamily
IPR003008Tubulin/FtsZ, GTPase domainDomain
IPR008280Tubulin/FtsZ, C-terminalHomologous Superfamily
IPR037103Tubulin/FtsZ-like, C-terminal domainHomologous Superfamily
IPR017975Tubulin, conserved siteConserved Site
IPR002452Alpha tubulinFamily
IPR000217TubulinFamily
IPR023123Tubulin, C-terminalHomologous Superfamily
IPR018316Tubulin/FtsZ, 2-layer sandwich domainDomain
IPR036525Tubulin/FtsZ, GTPase domain superfamilyHomologous Superfamily