7Q3O
Structure of CDX1 bound to hydroxymethylated DNA
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
I [auth K] | SCOP2B Superfamily | Homeodomain-like | 8070982 | 3000001 | SCOP2B (2022-06-29) |
J [auth C] | SCOP2B Superfamily | Homeodomain-like | 8070982 | 3000001 | SCOP2B (2022-06-29) |
K [auth E] | SCOP2B Superfamily | Homeodomain-like | 8070982 | 3000001 | SCOP2B (2022-06-29) |
L [auth G] | SCOP2B Superfamily | Homeodomain-like | 8070982 | 3000001 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
I [auth K] | PF00046 | e7q3oK1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF00046 | ECOD (1.6) |
J [auth C] | PF00046 | e7q3oC1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF00046 | ECOD (1.6) |
K [auth E] | PF00046 | e7q3oE1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF00046 | ECOD (1.6) |
L [auth G] | PF00046 | e7q3oG1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF00046 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
I [auth K], J [auth C], K [auth E], L [auth G] | PF00046 | Homeodomain (Homeodomain) | Homeodomain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
I [auth K], J [auth C], K [auth E], L [auth G] | IPR009057 | Homedomain-like superfamily | Homologous Superfamily |
I [auth K], J [auth C], K [auth E], L [auth G] | IPR006820 | Caudal-like activation domain | Domain |
I [auth K], J [auth C], K [auth E], L [auth G] | IPR017970 | Homeobox, conserved site | Conserved Site |
I [auth K], J [auth C], K [auth E], L [auth G] | IPR000047 | Helix-turn-helix motif | Conserved Site |
I [auth K], J [auth C], K [auth E], L [auth G] | IPR020479 | Homeodomain, metazoa | Domain |
I [auth K], J [auth C], K [auth E], L [auth G] | IPR001356 | Homeodomain | Domain |
I [auth K], J [auth C], K [auth E], L [auth G] | IPR047152 | Caudal homeobox | Family |
Pharos: Disease Associations Pharos Homepage Annotation
Chains | Drug Target   | Associated Disease |
---|---|---|
I [auth K], J [auth C], K [auth E], L [auth G] | P47902 | :