7PY4
Cryo-EM structure of ATP8B1-CDC50A in E2P autoinhibited state
External Resource: Annotation
- Domain Annotation: ECOD Classification
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Pharos: Disease Associations
- Membrane Protein Annotation: OPM
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: MemProtMD
- Membrane Protein Annotation: mpstruc
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | E1-E2_ATPase_N | e7py4A3 | A: beta sandwiches | X: jelly-roll | H: Calcium ATPase, transduction domain A (From Topology) | T: Calcium ATPase, transduction domain A | F: E1-E2_ATPase_N | ECOD (1.6) |
A | F_UNCLASSIFIED | e7py4A4 | A: alpha bundles | X: Calcium ATPase transmembrane domain-related (From Homology) | H: Calcium ATPase transmembrane domain-related | T: Calcium ATPase transmembrane domain M | F: F_UNCLASSIFIED | ECOD (1.6) |
A | Cation_ATPase | e7py4A1 | A: a+b complex topology | X: Metal cation-transporting ATPase, ATP-binding domain (From Topology) | H: Metal cation-transporting ATPase, ATP-binding domain (From Topology) | T: Metal cation-transporting ATPase, ATP-binding domain | F: Cation_ATPase | ECOD (1.6) |
A | Hydrolase_3_1 | e7py4A2 | A: a/b three-layered sandwiches | X: HAD domain-like | H: HAD domain-related | T: HAD-like | F: Hydrolase_3_1 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF16209 | Phospholipid-translocating ATPase N-terminal (PhoLip_ATPase_N) | Phospholipid-translocating ATPase N-terminal | - | Family | |
PF16212 | Phospholipid-translocating P-type ATPase C-terminal (PhoLip_ATPase_C) | Phospholipid-translocating P-type ATPase C-terminal | - | Family | |
PF00122 | E1-E2 ATPase (E1-E2_ATPase) | E1-E2 ATPase | - | Family | |
PF13246 | Cation transport ATPase (P-type) (Cation_ATPase) | Cation transport ATPase (P-type) | - | Family | |
PF03381 | LEM3 (ligand-effect modulator 3) family / CDC50 family (CDC50) | LEM3 (ligand-effect modulator 3) family / CDC50 family | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001757 | P-type ATPase | Family | |
IPR044492 | P-type ATPase, haloacid dehalogenase domain | Domain | |
IPR006539 | P-type ATPase, subfamily IV | Family | |
IPR018303 | P-type ATPase, phosphorylation site | PTM | |
IPR023298 | P-type ATPase, transmembrane domain superfamily | Homologous Superfamily | |
IPR032631 | P-type ATPase, N-terminal | Domain | |
IPR023214 | HAD superfamily | Homologous Superfamily | |
IPR008250 | P-type ATPase, A domain superfamily | Homologous Superfamily | |
IPR036412 | HAD-like superfamily | Homologous Superfamily | |
IPR032630 | P-type ATPase, C-terminal | Domain | |
IPR023299 | P-type ATPase, cytoplasmic domain N | Homologous Superfamily | |
IPR005045 | CDC50/LEM3 family | Family |
Pharos: Disease Associations Pharos Homepage Annotation
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | P-type ATPase (P-ATPase) | Phospholipid-translocating ATPase |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Chains | External Link | Comment |
---|---|---|
MemProtMD | Annotated as membrane protein by MemProtMD |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
Chains | Resource Link | Group | Subgroup | Protein |
---|---|---|---|---|
mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | P-type ATPase | P4-ATPase lipid flippase ATP8B1-CDC50A in E2P autoinhibited state |