7PM6
Cryo-EM structure of the actomyosin-V complex in the strong-ADP state (central 3er/2er)
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth B] | SCOP2B Superfamily | EF-hand | 8032927 | 3001983 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | EF-hand | 8032927 | 3001983 | SCOP2B (2022-06-29) |
B [auth A] | SCOP2B Superfamily | Myosin s1 fragment, N-terminal domain | 8032925 | 3000319 | SCOP2B (2022-06-29) |
B [auth A] | SCOP2B Superfamily | P-loop motor domain | 8032926 | 3002036 | SCOP2B (2022-06-29) |
F [auth D] | SCOP2B Superfamily | Myosin s1 fragment, N-terminal domain | 8032925 | 3000319 | SCOP2B (2022-06-29) |
F [auth D] | SCOP2B Superfamily | P-loop motor domain | 8032926 | 3002036 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
G [auth F] | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
G [auth F] | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
I [auth G] | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
I [auth G] | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | EF-hand_7_8 | e7pm6B2 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_8 | ECOD (1.6) |
A [auth B] | EF-hand_7_5 | e7pm6B1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_5 | ECOD (1.6) |
E | EF-hand_7_8 | e7pm6E2 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_8 | ECOD (1.6) |
E | EF-hand_7_5 | e7pm6E1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_5 | ECOD (1.6) |
B [auth A] | Myosin_N_1 | e7pm6A2 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: Myosin_N_1 | ECOD (1.6) |
B [auth A] | IQ_1 | e7pm6A3 | A: alpha bundles | X: Myosin VI lever arm (From Topology) | H: Myosin VI lever arm (From Topology) | T: Myosin VI lever arm | F: IQ_1 | ECOD (1.6) |
B [auth A] | Myosin_head | e7pm6A1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Myosin_head | ECOD (1.6) |
F [auth D] | Myosin_N_1 | e7pm6D2 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: Myosin_N_1 | ECOD (1.6) |
F [auth D] | IQ_1 | e7pm6D3 | A: alpha bundles | X: Myosin VI lever arm (From Topology) | H: Myosin VI lever arm (From Topology) | T: Myosin VI lever arm | F: IQ_1 | ECOD (1.6) |
F [auth D] | Myosin_head | e7pm6D1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Myosin_head | ECOD (1.6) |
C | Actin_1st | e7pm6C2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_1st | ECOD (1.6) |
C | Actin_2nd | e7pm6C1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_2nd | ECOD (1.6) |
G [auth F] | Actin_1st | e7pm6F2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_1st | ECOD (1.6) |
G [auth F] | Actin_2nd | e7pm6F1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_2nd | ECOD (1.6) |
I [auth G] | Actin_1st | e7pm6G2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_1st | ECOD (1.6) |
I [auth G] | Actin_2nd | e7pm6G1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_2nd | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
B [auth A], F [auth D] | PF00612 | IQ calmodulin-binding motif (IQ) | IQ calmodulin-binding motif | - | Motif |
B [auth A], F [auth D] | PF00063 | Myosin head (motor domain) (Myosin_head) | Myosin head (motor domain) | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Pharos: Disease Associations Pharos Homepage Annotation
Protein Modification Annotation
Modified Residue(s) | ||
---|---|---|
Chain | Residue(s) | Description |
C, G [auth F], I [auth G] | HIC | Parent Component: HIS :  AA0317 :  1'-methyl-L-histidine MOD:00322 |
D [auth H], H [auth I], J | DTH | AA0317 , AA0199 :  1'-methyl-L-histidine MOD:00322 , D-allo-threonine MOD:00863 | : 
D [auth H], H [auth I], J | EEP | AA0317 , AA0199 | : 
D [auth H], H [auth I], J | HYP | Parent Component: PRO :  AA0317 , AA0199 , AA0030 :  1'-methyl-L-histidine MOD:00322 , D-allo-threonine MOD:00863 , 4-hydroxy-L-proline MOD:00039 |