7PM4
Cryo-EM structures of human fucosidase FucA1 reveal insight into substate recognition and catalysis.
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C | PF16757 | e7pm4C2 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: Glycosyl hydrolase domain (From Topology) | T: Glycosyl hydrolase domain | F: PF16757 | ECOD (1.6) |
C | PF01120 | e7pm4C1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01120 | ECOD (1.6) |
A | PF16757 | e7pm4A2 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: Glycosyl hydrolase domain (From Topology) | T: Glycosyl hydrolase domain | F: PF16757 | ECOD (1.6) |
A | PF01120 | e7pm4A1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01120 | ECOD (1.6) |
B | PF16757 | e7pm4B1 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: Glycosyl hydrolase domain (From Topology) | T: Glycosyl hydrolase domain | F: PF16757 | ECOD (1.6) |
B | PF01120 | e7pm4B2 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01120 | ECOD (1.6) |
D | PF16757 | e7pm4D1 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: Glycosyl hydrolase domain (From Topology) | T: Glycosyl hydrolase domain | F: PF16757 | ECOD (1.6) |
D | PF01120 | e7pm4D2 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01120 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01120 | Alpha-L-fucosidase (Alpha_L_fucos) | Alpha-L-fucosidase | - | Domain | |
PF16757 | Alpha-L-fucosidase C-terminal domain (Fucosidase_C) | Alpha-L-fucosidase C-terminal domain | The C-terminal domain of PDB:1hl8 is constructed of eight anti-parallel-strands packed into two-sheets of five and three strands, respectively, forming a two-layer-sandwich containing a Greek key motif [1]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR031919 | Alpha-L-fucosidase, C-terminal | Domain | |
IPR016286 | Alpha-L-fucosidase, metazoa-type | Family | |
IPR017853 | Glycoside hydrolase superfamily | Homologous Superfamily | |
IPR018526 | Glycoside hydrolase, family 29, conserved site | Conserved Site | |
IPR013780 | Glycosyl hydrolase, all-beta | Homologous Superfamily | |
IPR000933 | Glycoside hydrolase, family 29 | Family |