7PCQ
Human carboxyhemoglobin bound to Staphylococcus aureus hemophore IsdB - 1:1 complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C | SCOP2B Superfamily | Globin-like | 8039836 | 3000554 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Globin-like | 8039836 | 3000554 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Globin-like | 8039838 | 3000554 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Globin-like | 8039838 | 3000554 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | NEAT domain-like | 8085273 | 3002054 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C | Globin | e7pcqC1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Globin | ECOD (1.6) |
A | Globin | e7pcqA1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Globin | ECOD (1.6) |
B | Globin | e7pcqB1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Globin | ECOD (1.6) |
D | Globin | e7pcqD1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Globin | ECOD (1.6) |
E | NEAT | e7pcqE2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: NEAT | ECOD (1.6) |
E | IsdH_HarA | e7pcqE3 | A: alpha arrays | X: Iron-regulated surface determinant protein H linker domain (From Topology) | H: Iron-regulated surface determinant protein H linker domain (From Topology) | T: Iron-regulated surface determinant protein H linker domain | F: IsdH_HarA | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00042 | Globin (Globin) | Globin | - | Domain | |
PF00042 | Globin (Globin) | Globin | - | Domain | |
PF05031 | Iron Transport-associated domain (NEAT) | Iron Transport-associated domain | NEAT domains are heme and/or hemoprotein-binding modules highly conserved in secondary structure [1]. They have roles in hemoprotein binding, heme extraction and heme transfer [2] | Domain | |
PF20861 | Iron-regulated surface determinant protein H/B, linker domain (Isd_H_B_linker) | Iron-regulated surface determinant protein H/B, linker domain | The bacterial pathogen Staphylococcus aureus uses two closely related receptors located on its surface, IsdH and IsdB, to capture from haemoglobin (Hb) the iron it needs to grow. Both proteins show conserved near iron transporter (NEAT) domains (Pfam ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR002338 | Hemoglobin, alpha-type | Family | |
IPR002339 | Hemoglobin, pi | Family | |
IPR009050 | Globin-like superfamily | Homologous Superfamily | |
IPR012292 | Globin/Protoglobin | Homologous Superfamily | |
IPR000971 | Globin | Domain | |
IPR050056 | Hemoglobin and related oxygen transporters | Family | |
IPR009050 | Globin-like superfamily | Homologous Superfamily | |
IPR012292 | Globin/Protoglobin | Homologous Superfamily | |
IPR000971 | Globin | Domain | |
IPR050056 | Hemoglobin and related oxygen transporters | Family | |
IPR002337 | Hemoglobin, beta-type | Family | |
IPR005877 | YSIRK Gram-positive signal peptide | Domain | |
IPR050436 | Iron-regulated surface determinant protein A | Family | |
IPR006635 | NEAT domain | Domain | |
IPR048652 | Iron-regulated surface determinant protein H/B, linker domain | Domain | |
IPR019929 | Iron-regulated surface determinant protein IsdB | Family | |
IPR037250 | NEAT domain superfamily | Homologous Superfamily | |
IPR019931 | LPXTG cell wall anchor domain | Domain |