Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AGag_p17e7ovqA1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: Gag_p17ECOD (1.6)
BGag_p17e7ovqB1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: Gag_p17ECOD (1.6)
CGag_p17e7ovqC1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: Gag_p17ECOD (1.6)
DGag_p17e7ovqD1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: Gag_p17ECOD (1.6)
F [auth b]Gag_p17e7ovqb1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: Gag_p17ECOD (1.6)
G [auth E]Gag_p17e7ovqE1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: Gag_p17ECOD (1.6)
I [auth c]Gag_p17e7ovqc1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: Gag_p17ECOD (1.6)
J [auth F]Gag_p17e7ovqF1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: Gag_p17ECOD (1.6)
K [auth R]Gag_p17e7ovqR1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: Gag_p17ECOD (1.6)
L [auth d]Gag_p17e7ovqd1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: Gag_p17ECOD (1.6)
M [auth S]Gag_p17e7ovqS1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: Gag_p17ECOD (1.6)
N [auth f]Gag_p17e7ovqf1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: Gag_p17ECOD (1.6)
O [auth I]Gag_p17e7ovqI1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: Gag_p17ECOD (1.6)
Q [auth K]Gag_p17e7ovqK1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: Gag_p17ECOD (1.6)
R [auth X]Gag_p17e7ovqX1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: Gag_p17ECOD (1.6)
T [auth Y]Gag_p17e7ovqY1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: Gag_p17ECOD (1.6)
V [auth l]Gag_p17e7ovql1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: Gag_p17ECOD (1.6)
W [auth O]Gag_p17e7ovqO1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: Gag_p17ECOD (1.6)
X [auth m]Gag_p17e7ovqm1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: Gag_p17ECOD (1.6)
E [auth P]Gag_p17e7ovqP1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: Gag_p17ECOD (1.6)
H [auth Q]Gag_p17e7ovqQ1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: Gag_p17ECOD (1.6)
P [auth h]Gag_p17e7ovqh1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: Gag_p17ECOD (1.6)
S [auth M]Gag_p17e7ovqM1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: Gag_p17ECOD (1.6)
U [auth Z]Gag_p17e7ovqZ1 A: alpha arraysX: Retroviral matrix proteins (From Topology)H: Retroviral matrix proteins (From Topology)T: Retroviral matrix proteinsF: Gag_p17ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00540gag gene protein p17 (matrix protein) (Gag_p17)gag gene protein p17 (matrix protein)The matrix protein forms an icosahedral shell associated with the inner membrane of the mature immunodeficiency virus.Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR000071Immunodeficiency lentiviral matrix, N-terminalDomain
IPR045345Retroviral nucleocapsid Gag protein p24, C-terminal domainDomain
IPR036875Zinc finger, CCHC-type superfamilyHomologous Superfamily
IPR001878Zinc finger, CCHC-typeDomain
IPR008919Retrovirus capsid, N-terminalHomologous Superfamily
IPR010999Retroviral matrix proteinHomologous Superfamily
IPR012344Matrix protein, lentiviral and alpha-retroviral, N-terminalHomologous Superfamily
IPR050195Primate lentivirus group Gag polyproteinFamily
IPR014817Gag protein p6Domain
IPR008916Retrovirus capsid, C-terminalHomologous Superfamily