Crystal structure of a trapped Pab-AGOG/single-standed DNA covalent intermediate
External Resource: Annotation
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
C | PF09171 | e7oueC1 | A: alpha arrays | X: HhH/H2TH | H: SAM/DNA-glycosylase | T: DNA-glycosylase | F: PF09171 | ECOD (1.6) |
A | PF09171 | e7oueA1 | A: alpha arrays | X: HhH/H2TH | H: SAM/DNA-glycosylase | T: DNA-glycosylase | F: PF09171 | ECOD (1.6) |
E | PF09171 | e7oueE1 | A: alpha arrays | X: HhH/H2TH | H: SAM/DNA-glycosylase | T: DNA-glycosylase | F: PF09171 | ECOD (1.6) |
G | PF09171 | e7oueG1 | A: alpha arrays | X: HhH/H2TH | H: SAM/DNA-glycosylase | T: DNA-glycosylase | F: PF09171 | ECOD (1.6) |
Chains | Accession | Name | Description | Comments | Source |
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| PF09171 | N-glycosylase/DNA lyase (AGOG) | N-glycosylase/DNA lyase | This domain is predominantly found in the Archaeal protein N-glycosylase/DNA lyase. | Domain |
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
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| N-glycosylase/DNA lyase | | | - |
| DNA (5'-D(*TP*TP*TP*(PED)P*TP*TP*TP*CP*T)-3') | - | - | - |
Protein Modification Annotation
Modified Residue(s) |
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Chain | Residue(s) | Description |
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| PED | RESID:  AA0494
PSI-MOD :  N-(DNA-1',2'-dideoxyribos-1'-ylidene)-L-prolinium MOD:01454 |