Structure of the outer-membrane core complex (inner ring) from a conjugative type IV secretion system
External Resource: Annotation
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
A | F_UNCLASSIFIED | e7oknA1 | A: beta barrels | X: CBF-like | H: TraF (From Topology) | T: TraF | F: F_UNCLASSIFIED | ECOD (1.6) |
AA [auth a] | F_UNCLASSIFIED | e7okna1 | A: beta barrels | X: CBF-like | H: TraF (From Topology) | T: TraF | F: F_UNCLASSIFIED | ECOD (1.6) |
C | F_UNCLASSIFIED | e7oknC1 | A: beta barrels | X: CBF-like | H: TraF (From Topology) | T: TraF | F: F_UNCLASSIFIED | ECOD (1.6) |
CA [auth c] | F_UNCLASSIFIED | e7oknc1 | A: beta barrels | X: CBF-like | H: TraF (From Topology) | T: TraF | F: F_UNCLASSIFIED | ECOD (1.6) |
E | F_UNCLASSIFIED | e7oknE1 | A: beta barrels | X: CBF-like | H: TraF (From Topology) | T: TraF | F: F_UNCLASSIFIED | ECOD (1.6) |
EA [auth e] | F_UNCLASSIFIED | e7okne1 | A: beta barrels | X: CBF-like | H: TraF (From Topology) | T: TraF | F: F_UNCLASSIFIED | ECOD (1.6) |
G | F_UNCLASSIFIED | e7oknG1 | A: beta barrels | X: CBF-like | H: TraF (From Topology) | T: TraF | F: F_UNCLASSIFIED | ECOD (1.6) |
GA [auth g] | F_UNCLASSIFIED | e7okng1 | A: beta barrels | X: CBF-like | H: TraF (From Topology) | T: TraF | F: F_UNCLASSIFIED | ECOD (1.6) |
I | F_UNCLASSIFIED | e7oknI1 | A: beta barrels | X: CBF-like | H: TraF (From Topology) | T: TraF | F: F_UNCLASSIFIED | ECOD (1.6) |
K | F_UNCLASSIFIED | e7oknK1 | A: beta barrels | X: CBF-like | H: TraF (From Topology) | T: TraF | F: F_UNCLASSIFIED | ECOD (1.6) |
M | F_UNCLASSIFIED | e7oknM1 | A: beta barrels | X: CBF-like | H: TraF (From Topology) | T: TraF | F: F_UNCLASSIFIED | ECOD (1.6) |
O | F_UNCLASSIFIED | e7oknO1 | A: beta barrels | X: CBF-like | H: TraF (From Topology) | T: TraF | F: F_UNCLASSIFIED | ECOD (1.6) |
Q | F_UNCLASSIFIED | e7oknQ1 | A: beta barrels | X: CBF-like | H: TraF (From Topology) | T: TraF | F: F_UNCLASSIFIED | ECOD (1.6) |
S | F_UNCLASSIFIED | e7oknS1 | A: beta barrels | X: CBF-like | H: TraF (From Topology) | T: TraF | F: F_UNCLASSIFIED | ECOD (1.6) |
U | F_UNCLASSIFIED | e7oknU1 | A: beta barrels | X: CBF-like | H: TraF (From Topology) | T: TraF | F: F_UNCLASSIFIED | ECOD (1.6) |
W | F_UNCLASSIFIED | e7oknW1 | A: beta barrels | X: CBF-like | H: TraF (From Topology) | T: TraF | F: F_UNCLASSIFIED | ECOD (1.6) |
Y | F_UNCLASSIFIED | e7oknY1 | A: beta barrels | X: CBF-like | H: TraF (From Topology) | T: TraF | F: F_UNCLASSIFIED | ECOD (1.6) |
Chains | Accession | Name | Description | Comments | Source |
---|
A, AA [auth a], C, CA [auth c], E, EA [auth e], G, GA [auth g], I, K, M, O, Q, S, U, W, Y | PF03743 | Bacterial conjugation TrbI-like protein (TrbI) | Bacterial conjugation TrbI-like protein | - | Family |
B, BA [auth b], D, DA [auth d], F, FA [auth f], H, HA [auth h], J, L, N, P, R, T, V, X, Z | PF09676 | Type IV conjugative transfer system lipoprotein (TraV) (TraV) | Type IV conjugative transfer system lipoprotein (TraV) | - | Family |
Chains | Accession | Name | Type |
---|
A, AA [auth a], C, CA [auth c], E, EA [auth e], G, GA [auth g], I, K, M, O, Q, S, U, W, Y | IPR005498 | Type IV secretion system, VirB10/TraB/TrbI | Family |
B, BA [auth b], D, DA [auth d], F, FA [auth f], H, HA [auth h], J, L, N, P, R, T, V, X, Z | IPR014118 | Type IV conjugative transfer system protein TraV | Family |
Chains | External Link | Type | Class | Superfamily | Family |
---|
B, BA [auth b], D, DA [auth d], F, FA [auth f], H, HA [auth h], J, L, N, P, R, T, V, X, Z | OPM | Transmembrane | Alpha-helical polytopic | Type IV secretory system | Type IV secretion system, VirB10/TraB /TrbI |
Chains | External Link | Comment |
---|
B, BA [auth b], D, DA [auth d], F, FA [auth f], H, HA [auth h], J, L, N, P, R, T, V, X, Z | PDBTM | Annotated as membrane protein by PDBTM |
Chains | Resource Link | Group | Subgroup | Protein |
---|
B, BA [auth b], D, DA [auth d], F, FA [auth f], H, HA [auth h], J, L, N, P, R, T, V, X, Z | mpstruc | TRANSMEMBRANE PROTEINS: BETA-BARREL | Type IV Secretion Systems | outer-membrane core complex (inner ring) from a conjugative type IV secretion system |