7OKA | pdb_00007oka

Crystal structure of Pseudomonas aeruginosa LpxA in complex with compound 14

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
Z	SNF2-rel_dom,Helicase_C	e7okaZ1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
Y	SNF2-rel_dom,Helicase_C	e7okaY1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
X	SNF2-rel_dom,Helicase_C	e7okaX1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
W	SNF2-rel_dom,Helicase_C	e7okaW1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
V	SNF2-rel_dom,Helicase_C	e7okaV1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
U	SNF2-rel_dom,Helicase_C	e7okaU1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
T	SNF2-rel_dom,Helicase_C	e7okaT1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
S	SNF2-rel_dom,Helicase_C	e7okaS1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
R	SNF2-rel_dom,Helicase_C	e7okaR1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
Q	SNF2-rel_dom,Helicase_C	e7okaQ1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
P	SNF2-rel_dom,Helicase_C	e7okaP1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
O [auth L]	SNF2-rel_dom,Helicase_C	e7okaL1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
N [auth K]	SNF2-rel_dom,Helicase_C	e7okaK1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
M [auth J]	SNF2-rel_dom,Helicase_C	e7okaJ1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
L [auth O]	SNF2-rel_dom,Helicase_C	e7okaO1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
K [auth N]	SNF2-rel_dom,Helicase_C	e7okaN1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
J [auth M]	SNF2-rel_dom,Helicase_C	e7okaM1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
I	SNF2-rel_dom,Helicase_C	e7okaI1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
H	SNF2-rel_dom,Helicase_C	e7okaH1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
G	SNF2-rel_dom,Helicase_C	e7okaG1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
F	SNF2-rel_dom,Helicase_C	e7okaF1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
E	SNF2-rel_dom,Helicase_C	e7okaE1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
DA [auth d]	SNF2-rel_dom,Helicase_C	e7okad1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
D	SNF2-rel_dom,Helicase_C	e7okaD1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
CA [auth c]	SNF2-rel_dom,Helicase_C	e7okac1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
C	SNF2-rel_dom,Helicase_C	e7okaC1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
BA [auth b]	SNF2-rel_dom,Helicase_C	e7okab1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
B	SNF2-rel_dom,Helicase_C	e7okaB1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
AA [auth a]	SNF2-rel_dom,Helicase_C	e7okaa1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)
A	SNF2-rel_dom,Helicase_C	e7okaA1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: SNF2-rel_dom,Helicase_C	ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, AA [auth a], B, BA [auth b], C, A, AA [auth a], B, BA [auth b], C, CA [auth c], D, DA [auth d], E, F, G, H, I, J [auth M], K [auth N], L [auth O], M [auth J], N [auth K], O [auth L], P, Q, R, S, T, U, V, W, X, Y, Z	PF00132	Bacterial transferase hexapeptide (six repeats) (Hexapep)	Bacterial transferase hexapeptide (six repeats)	-	Repeat
A, AA [auth a], B, BA [auth b], C, A, AA [auth a], B, BA [auth b], C, CA [auth c], D, DA [auth d], E, F, G, H, I, J [auth M], K [auth N], L [auth O], M [auth J], N [auth K], O [auth L], P, Q, R, S, T, U, V, W, X, Y, Z	PF13720	Udp N-acetylglucosamine O-acyltransferase; Domain 2 (Acetyltransf_11)	Udp N-acetylglucosamine O-acyltransferase; Domain 2	This is domain 2, or the C-terminal domain, of Udp N-acetylglucosamine O-acyltransferase. This enzyme is a zinc-dependent enzyme that catalyses the deacetylation of UDP-3-O-((R)-3-hydroxymyristoyl)-N-acetylglucosamine to form UDP-3-O-(R-hydroxymyris ...	This is domain 2, or the C-terminal domain, of Udp N-acetylglucosamine O-acyltransferase. This enzyme is a zinc-dependent enzyme that catalyses the deacetylation of UDP-3-O-((R)-3-hydroxymyristoyl)-N-acetylglucosamine to form UDP-3-O-(R-hydroxymyristoyl)glucosamine and acetate.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, AA [auth a], B, BA [auth b], C, A, AA [auth a], B, BA [auth b], C, CA [auth c], D, DA [auth d], E, F, G, H, I, J [auth M], K [auth N], L [auth O], M [auth J], N [auth K], O [auth L], P, Q, R, S, T, U, V, W, X, Y, Z	Acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase	acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity O-acyltransferase activity acyltransferase activity acyltransferase activity, transferring groups other than amino-acyl groups transferase activity catalytic activity	lipopolysaccharide biosynthetic process carbohydrate derivative biosynthetic process carbohydrate metabolic process polysaccharide biosynthetic process carbohydrate biosynthetic process liposaccharide metabolic process lipid biosynthetic process carbohydrate derivative metabolic process primary metabolic process macromolecule biosynthetic process lipopolysaccharide metabolic process polysaccharide metabolic process biosynthetic process metabolic process lipopolysaccharide biosynthetic process carbohydrate derivative biosynthetic process carbohydrate metabolic process polysaccharide biosynthetic process carbohydrate biosynthetic process liposaccharide metabolic process lipid biosynthetic process carbohydrate derivative metabolic process primary metabolic process macromolecule biosynthetic process lipopolysaccharide metabolic process polysaccharide metabolic process biosynthetic process metabolic process cellular process macromolecule metabolic process lipid metabolic process lipooligosaccharide metabolic process glycolipid metabolic process lipid A biosynthetic process glycolipid biosynthetic process phospholipid biosynthetic process phospholipid metabolic process lipid A metabolic process organophosphate metabolic process organophosphate biosynthetic process phosphate-containing compound metabolic process lipooligosaccharide biosynthetic process phosphorus metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, AA [auth a], B, BA [auth b], C, A, AA [auth a], B, BA [auth b], C, CA [auth c], D, DA [auth d], E, F, G, H, I, J [auth M], K [auth N], L [auth O], M [auth J], N [auth K], O [auth L], P, Q, R, S, T, U, V, W, X, Y, Z	IPR011004	Trimeric LpxA-like superfamily	Homologous Superfamily
A, AA [auth a], B, BA [auth b], C, A, AA [auth a], B, BA [auth b], C, CA [auth c], D, DA [auth d], E, F, G, H, I, J [auth M], K [auth N], L [auth O], M [auth J], N [auth K], O [auth L], P, Q, R, S, T, U, V, W, X, Y, Z	IPR029098	UDP N-acetylglucosamine O-acyltransferase, C-terminal	Domain
A, AA [auth a], B, BA [auth b], C, A, AA [auth a], B, BA [auth b], C, CA [auth c], D, DA [auth d], E, F, G, H, I, J [auth M], K [auth N], L [auth O], M [auth J], N [auth K], O [auth L], P, Q, R, S, T, U, V, W, X, Y, Z	IPR010137	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase	Family
A, AA [auth a], B, BA [auth b], C, A, AA [auth a], B, BA [auth b], C, CA [auth c], D, DA [auth d], E, F, G, H, I, J [auth M], K [auth N], L [auth O], M [auth J], N [auth K], O [auth L], P, Q, R, S, T, U, V, W, X, Y, Z	IPR018357	Hexapeptide transferase, conserved site	Conserved Site
A, AA [auth a], B, BA [auth b], C, A, AA [auth a], B, BA [auth b], C, CA [auth c], D, DA [auth d], E, F, G, H, I, J [auth M], K [auth N], L [auth O], M [auth J], N [auth K], O [auth L], P, Q, R, S, T, U, V, W, X, Y, Z	IPR037157	UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily	Homologous Superfamily
A, AA [auth a], B, BA [auth b], C, A, AA [auth a], B, BA [auth b], C, CA [auth c], D, DA [auth d], E, F, G, H, I, J [auth M], K [auth N], L [auth O], M [auth J], N [auth K], O [auth L], P, Q, R, S, T, U, V, W, X, Y, Z	IPR001451	Hexapeptide repeat	Repeat

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.