Cryo-EM structure of 70S ribosome stalled with TnaC peptide and RF2
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | Trypsin | e7oj0B1 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| C | Trypsin | e7oj0C1 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| D | Trypsin | e7oj0D1 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| E | Trypsin | e7oj0E1 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| F | Trypsin | e7oj0F1 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| G | Trypsin | e7oj0G1 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| I | Trypsin | e7oj0I1 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| J | Trypsin | e7oj0J1 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| K | Trypsin | e7oj0K1 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| L | Trypsin | e7oj0L1 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| M | Trypsin | e7oj0M1 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| N | Trypsin | e7oj0N1 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| O | Trypsin | e7oj0O1 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| P | Trypsin | e7oj0P1 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| Q | Trypsin | e7oj0Q1 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| R | Trypsin | e7oj0R1 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| S | Trypsin | e7oj0S1 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| T | Trypsin | e7oj0T1 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| U | Trypsin | e7oj0U1 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| X [auth c] | Trypsin | e7oj0c1 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| Y [auth d] | Trypsin | e7oj0d1 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| Z [auth e] | Trypsin | e7oj0e1 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| AA [auth f] | Trypsin | e7oj0f1 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| BA [auth g] | Trypsin | e7oj0g1 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| CA [auth h] | Trypsin | e7oj0h1 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| DA [auth i] | Trypsin | e7oj0i1 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| EA [auth j] | Trypsin | e7oj0j1 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| FA [auth k] | Trypsin | e7oj0k1 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| GA [auth l] | Trypsin | e7oj0l1 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| HA [auth m] | Trypsin | e7oj0m1 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| IA [auth n] | Trypsin | e7oj0n1 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| JA [auth o] | Trypsin | e7oj0o1 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| LA [auth q] | Trypsin | e7oj0q1 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| NA [auth s] | Trypsin | e7oj0s1 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| OA [auth t] | Trypsin | e7oj0t1 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| PA [auth u] | Trypsin | e7oj0u1 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| QA [auth v] | Trypsin | e7oj0v1 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| RA [auth w] | Trypsin | e7oj0w1 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| SA [auth x] | Trypsin | e7oj0x1 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| TA [auth y] | Trypsin | e7oj0y1 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| UA [auth z] | Trypsin | e7oj0z1 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| VA [auth 0] | Trypsin | e7oj001 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| WA [auth 1] | Trypsin | e7oj011 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| XA [auth 2] | Trypsin | e7oj021 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| YA [auth 3] | Trypsin | e7oj031 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| ZA [auth 4] | Trypsin | e7oj041 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| FB [auth 5] | Trypsin | e7oj051 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| GB [auth 9] | Glyco_transf_41 | e7oj091 | A: alpha arrays | X: Nuclear receptor ligand-binding domain | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Glyco_transf_41 | ECOD (v295) |
| H | Trypsin | e7oj0H1 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| EB [auth 8] | Trypsin | e7oj081 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| MA [auth r] | Trypsin | e7oj0r1 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
| KA [auth p] | Trypsin | e7oj0p1 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin | ECOD (v295) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Protein Modification Annotation
| Modified Residue(s) | ||
|---|---|---|
| Chain | Residue(s) | Description |
| V [auth a] | 1MG | Parent Component: G |
| V [auth a] | 2MA | Parent Component: A |
| V [auth a] | 2MG | Parent Component: G |
| V [auth a] | 3TD | Parent Component: U |
| V [auth a] | 5MC | Parent Component: C |
| V [auth a] | 5MU | Parent Component: U |
| V [auth a] | 6MZ | Parent Component: A |
| V [auth a] | G7M | Parent Component: G |
| V [auth a] | OMC | Parent Component: C |
| V [auth a] | OMG | Parent Component: G |
| V [auth a] | OMU | Parent Component: U |
| V [auth a] | PSU | Parent Component: U |
| Y [auth d] | MEQ | Parent Component: GLN :  AA0071 :  N5-methyl-L-glutamine MOD:00080 |
| CB [auth V] | 5MU | Parent Component: U :  AA0071 |
| 2MG | Parent Component: G :  AA0071 | |
| 4OC | Parent Component: C :  AA0071 | |
| 5MC | Parent Component: C :  AA0071 | |
| G7M | Parent Component: G :  AA0071 | |
| MA6 | Parent Component: A :  AA0071 | |
| PSU | Parent Component: U :  AA0071 | |
| UR3 | Parent Component: U :  AA0071 | |














