7OIF

CspA-27 cotranslational folding intermediate 2


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
J [auth H]SCOP2B SuperfamilyRibosomal protein L9 C-domain8032958 3000329 SCOP2B (2022-06-29)
J [auth H]SCOP2B SuperfamilyL9 N-domain-like8032960 3000338 SCOP2B (2022-06-29)
K [auth I]SCOP2B SuperfamilyRibosomal protein L138096350 3001134 SCOP2B (2022-06-29)
L [auth J]SCOP2B Superfamily50S Ribosomal protein L14-like8103358 3000433 SCOP2B (2022-06-29)
M [auth K]SCOP2B SuperfamilyRibosomal proteins L15p and L18e8070553 3001045 SCOP2B (2022-06-29)
N [auth L]SCOP2B SuperfamilyRibosomal protein L16p/L10e8096366 3000884 SCOP2B (2022-06-29)
O [auth M]SCOP2 FamilyProkaryotic ribosomal protein L178106019 4003526 SCOP2 (2022-06-29)
O [auth M]SCOP2 SuperfamilyProkaryotic ribosomal protein L178106020 3000995 SCOP2 (2022-06-29)
S [auth Q]SCOP2B Superfamilyl21p-like8096354 3002005 SCOP2B (2022-06-29)
T [auth R]SCOP2B SuperfamilyRibosomal protein L228096336 3001078 SCOP2B (2022-06-29)
U [auth S]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8093682 3000210 SCOP2B (2022-06-29)
W [auth U]SCOP2B SuperfamilyRibosomal protein L25-like8042538 3001161 SCOP2B (2022-06-29)
BA [auth Z]SCOP2B SuperfamilyL28p-like8106076 3001966 SCOP2B (2022-06-29)
DA [auth b]SCOP2 FamilyRibosomal protein L33p8106035 4000511 SCOP2 (2022-06-29)
DA [auth b]SCOP2 SuperfamilyZn-binding ribosomal proteins8106036 3001320 SCOP2 (2022-06-29)
GA [auth e]SCOP2B SuperfamilyRibosomal protein L368035391 3001346 SCOP2B (2022-06-29)
MA [auth k]SCOP2B SuperfamilyRibosomal protein S78077979 3000799 SCOP2B (2022-06-29)
QA [auth o]SCOP2B SuperfamilyTranslational machinery components8104219 3000571 SCOP2B (2022-06-29)
VA [auth t]SCOP2B SuperfamilyRibosomal protein S168097402 3000680 SCOP2B (2022-06-29)
E [auth C]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8035393 3000334 SCOP2B (2022-06-29)
E [auth C]SCOP2B SuperfamilyNucleic acid-binding proteins8035394 3000135 SCOP2B (2022-06-29)
YA [auth w]SCOP2 FamilyRibosomal protein S198106159 4001081 SCOP2 (2022-06-29)
YA [auth w]SCOP2 SuperfamilyRibosomal protein S198106160 3000686 SCOP2 (2022-06-29)
F [auth D]SCOP2B SuperfamilyTranslational proteins8032955 3000811 SCOP2B (2022-06-29)
G [auth E]SCOP2B SuperfamilyRibosomal protein L48096356 3001146 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
J [auth H]PF01281e7oifH1 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: PF01281ECOD (1.6)
J [auth H]PF03948e7oifH2 A: a+b two layersX: Ribosomal protein L9 C-domain (From Topology)H: Ribosomal protein L9 C-domain (From Topology)T: Ribosomal protein L9 C-domainF: PF03948ECOD (1.6)
K [auth I]PF00572e7oifI1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: PF00572ECOD (1.6)
L [auth J]PF00238e7oifJ1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF00238ECOD (1.6)
M [auth K]PF00828e7oifK1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF00828ECOD (1.6)
N [auth L]PF00252e7oifL1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: PF00252ECOD (1.6)
O [auth M]PF01196e7oifM1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: PF01196ECOD (1.6)
P [auth N]PF00861e7oifN1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00861ECOD (1.6)
Q [auth O]PF01245e7oifO1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01245ECOD (1.6)
R [auth P]PF00453e7oifP1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: PF00453ECOD (1.6)
S [auth Q]PF00829e7oifQ1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: PF00829ECOD (1.6)
T [auth R]PF00237e7oifR1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: PF00237ECOD (1.6)
U [auth S]PF00276e7oifS1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00276ECOD (1.6)
V [auth T]PF00467,PF17136e7oifT1 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF17136ECOD (1.6)
W [auth U]PF01386e7oifU1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: PF01386ECOD (1.6)
X [auth V]PF01016e7oifV1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: PF01016ECOD (1.6)
Y [auth W]PF00830e7oifW1 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: PF00830ECOD (1.6)
Z [auth X]PF00831e7oifX1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: PF00831ECOD (1.6)
AA [auth Y]PF00327e7oifY1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: PF00327ECOD (1.6)
BA [auth Z]PF01197e7oifZ1 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: PF01197ECOD (1.6)
CA [auth a]PF01783e7oifa1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01783ECOD (1.6)
DA [auth b]PF00471e7oifb1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF00471ECOD (1.6)
EA [auth c]PF00468e7oifc1 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: PF00468ECOD (1.6)
FA [auth d]PF01632e7oifd1 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: PF01632ECOD (1.6)
GA [auth e]PF00444e7oife1 A: few secondary structure elementsX: Ribosomal protein L36 (From Topology)H: Ribosomal protein L36 (From Topology)T: Ribosomal protein L36F: PF00444ECOD (1.6)
HA [auth f]PF00318e7oiff1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: PF00318ECOD (1.6)
IA [auth g]PF00189e7oifg1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: PF00189ECOD (1.6)
IA [auth g]PF07650e7oifg2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: PF07650ECOD (1.6)
JA [auth h]PF00163,PF01479e7oifh1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: PF00163,PF01479ECOD (1.6)
KA [auth i]PF03719e7oifi1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF03719ECOD (1.6)
KA [auth i]PF00333e7oifi2 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: PF00333ECOD (1.6)
LA [auth j]PF01250e7oifj1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: PF01250ECOD (1.6)
MA [auth k]PF00177e7oifk1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: PF00177ECOD (1.6)
NA [auth l]PF00410e7oifl2 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: PF00410ECOD (1.6)
NA [auth l]PF00410e7oifl1 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: PF00410ECOD (1.6)
OA [auth m]PF00380e7oifm1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF00380ECOD (1.6)
PA [auth n]PF00338e7oifn1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: PF00338ECOD (1.6)
QA [auth o]PF00411e7oifo1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00411ECOD (1.6)
RA [auth p]PF00164e7oifp1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00164ECOD (1.6)
SA [auth q]PF00416e7oifq1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: PF00416ECOD (1.6)
TA [auth r]PF00253e7oifr1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF00253ECOD (1.6)
UA [auth s]PF00312e7oifs1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: PF00312ECOD (1.6)
VA [auth t]PF00886e7oift1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: PF00886ECOD (1.6)
WA [auth u]PF00366e7oifu1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00366ECOD (1.6)
E [auth C]PF00181e7oifC2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00181ECOD (1.6)
E [auth C]PF03947e7oifC1 A: beta barrelsX: SH3H: SH3T: SH3F: PF03947ECOD (1.6)
XA [auth v]PF01084e7oifv1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF01084ECOD (1.6)
YA [auth w]PF00203e7oifw1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: PF00203ECOD (1.6)
ZA [auth x]PF01649e7oifx1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: PF01649ECOD (1.6)
AB [auth y]PF01165e7oify1 A: extended segmentsX: 30S ribosomal protein S21 (From Topology)H: 30S ribosomal protein S21 (From Topology)T: 30S ribosomal protein S21F: PF01165ECOD (1.6)
CB [auth B]PF00313e7oifB1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00313ECOD (1.6)
F [auth D]PF00297e7oifD1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF00297ECOD (1.6)
G [auth E]PF00573e7oifE1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: PF00573ECOD (1.6)
H [auth F]PF00281,PF00673e7oifF1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: PF00281,PF00673ECOD (1.6)
I [auth G]PF00347e7oifG2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: PF00347ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
J [auth H]PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domain- Domain
J [auth H]PF03948Ribosomal protein L9, C-terminal domain (Ribosomal_L9_C)Ribosomal protein L9, C-terminal domain- Domain
K [auth I]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
L [auth J]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
M [auth K]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
N [auth L]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
O [auth M]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
S [auth Q]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
T [auth R]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
U [auth S]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
W [auth U]PF01386Ribosomal L25p family (Ribosomal_L25p)Ribosomal L25p familyRibosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress.Domain
BA [auth Z]PF01197Ribosomal protein L31 (Ribosomal_L31)Ribosomal protein L31- Family
DA [auth b]PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
EA [auth c]PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
GA [auth e]PF00444Ribosomal protein L36 (Ribosomal_L36)Ribosomal protein L36- Domain
JA [auth h]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
JA [auth h]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
MA [auth k]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
QA [auth o]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
VA [auth t]PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
E [auth C]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
E [auth C]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
YA [auth w]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
ZA [auth x]PF01649Ribosomal protein S20 (Ribosomal_S20p)Ribosomal protein S20- Family
AB [auth y]PF01165Ribosomal protein S21 (Ribosomal_S21)Ribosomal protein S21- Family
F [auth D]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
G [auth E]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 1]23S rRNA---
J [auth H]50S ribosomal protein L9
K [auth I]50S ribosomal protein L13
L [auth J]50S ribosomal protein L14
M [auth K]50S ribosomal protein L15
N [auth L]50S ribosomal protein L16
O [auth M]50S ribosomal protein L17---
P [auth N]50S ribosomal protein L18---
Q [auth O]50S ribosomal protein L19---
R [auth P]50S ribosomal protein L20---
S [auth Q]50S ribosomal protein L21
B [auth 2]16S rRNA---
T [auth R]50S ribosomal protein L22
U [auth S]50S ribosomal protein L23---
V [auth T]50S ribosomal protein L24---
W [auth U]50S ribosomal protein L25
X [auth V]50S ribosomal protein L27---
Y [auth W]50S ribosomal protein L28---
Z [auth X]50S ribosomal protein L29---
AA [auth Y]50S ribosomal protein L30---
BA [auth Z]50S ribosomal protein L31
CA [auth a]50S ribosomal protein L32---
C [auth 3]5S rRNA---
DA [auth b]50S ribosomal protein L33
EA [auth c]50S ribosomal protein L34
FA [auth d]50S ribosomal protein L35---
GA [auth e]50S ribosomal protein L36
HA [auth f]30S ribosomal protein S2---
IA [auth g]30S ribosomal protein S3---
JA [auth h]30S ribosomal protein S4---
KA [auth i]30S ribosomal protein S5---
LA [auth j]30S ribosomal protein S6---
MA [auth k]30S ribosomal protein S7
D [auth 4]mRNA---
NA [auth l]30S ribosomal protein S8---
OA [auth m]30S ribosomal protein S9---
PA [auth n]30S ribosomal protein S10---
QA [auth o]30S ribosomal protein S11
RA [auth p]30S ribosomal protein S12---
SA [auth q]30S ribosomal protein S13---
TA [auth r]30S ribosomal protein S14---
UA [auth s]30S ribosomal protein S15---
VA [auth t]30S ribosomal protein S16
WA [auth u]30S ribosomal protein S17---
E [auth C]50S ribosomal protein L2
XA [auth v]30S ribosomal protein S18---
YA [auth w]30S ribosomal protein S19
ZA [auth x]30S ribosomal protein S20---
AB [auth y]30S ribosomal protein S21---
BB [auth z]tRNA-Ser---
CB [auth B]CspA transcriptional activator---
F [auth D]50S ribosomal protein L3
G [auth E]50S ribosomal protein L4
H [auth F]50S ribosomal protein L5---
I [auth G]50S ribosomal protein L6---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
J [auth H]IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
J [auth H]IPR020069Large ribosomal subunit protein bL9, C-terminalDomain
J [auth H]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
J [auth H]IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
J [auth H]IPR020594Large ribosomal subunit protein bL9, bacteria/chloroplastFamily
J [auth H]IPR036791Large ribosomal subunit protein bL9, C-terminal domain superfamilyHomologous Superfamily
J [auth H]IPR000244Large ribosomal subunit protein bL9Family
K [auth I]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
K [auth I]IPR005822Large ribosomal subunit protein uL13Family
K [auth I]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
K [auth I]IPR005823Large ribosomal subunit protein uL13, bacterial-typeFamily
L [auth J]IPR005745Large ribosomal subunit protein uL14, bacterial-typeFamily
L [auth J]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
L [auth J]IPR000218Large ribosomal subunit protein uL14Family
L [auth J]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
M [auth K]IPR005749Large ribosomal subunit protein uL15, bacterial-typeFamily
M [auth K]IPR021131Large ribosomal subunit protein uL15/eL18Domain
M [auth K]IPR030878Large ribosomal subunit protein uL15Family
M [auth K]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
M [auth K]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
N [auth L]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
N [auth L]IPR020798Large ribosomal subunit protein uL16, conserved siteConserved Site
N [auth L]IPR000114Large ribosomal subunit protein uL16, bacterial-typeFamily
N [auth L]IPR016180Large ribosomal subunit protein uL16 domainDomain
N [auth L]IPR047873Large ribosomal subunit protein uL16Family
S [auth Q]IPR028909Large ribosomal subunit protein bL21-likeFamily
S [auth Q]IPR001787Large ribosomal subunit protein bL21Family
S [auth Q]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
S [auth Q]IPR018258Large ribosomal subunit protein bL21, conserved siteConserved Site
T [auth R]IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
T [auth R]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
T [auth R]IPR001063Large ribosomal subunit protein uL22Family
T [auth R]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
T [auth R]IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
W [auth U]IPR020055Ribosomal protein bL25, short-formFamily
W [auth U]IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
W [auth U]IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
W [auth U]IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
BA [auth Z]IPR002150Large ribosomal subunit protein bL31 type A/BFamily
BA [auth Z]IPR027491Large ribosomal subunit protein bL31 type AFamily
BA [auth Z]IPR042105Large ribosomal subunit protein bL31 superfamilyHomologous Superfamily
BA [auth Z]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
DA [auth b]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
DA [auth b]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
DA [auth b]IPR001705Large ribosomal subunit protein bL33Family
DA [auth b]IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
EA [auth c]IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
EA [auth c]IPR000271Large ribosomal subunit protein bL34Family
GA [auth e]IPR000473Large ribosomal subunit protein bL36Family
GA [auth e]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
MA [auth k]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
MA [auth k]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
MA [auth k]IPR000235Small ribosomal subunit protein uS7Family
MA [auth k]IPR005717Small ribosomal subunit protein uS7, bacterial/organellar-typeFamily
MA [auth k]IPR023798Small ribosomal subunit protein uS7 domainDomain
QA [auth o]IPR001971Small ribosomal subunit protein uS11Family
QA [auth o]IPR019981Small ribosomal subunit protein uS11, bacterial-typeFamily
QA [auth o]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
QA [auth o]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
VA [auth t]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
VA [auth t]IPR000307Small ribosomal subunit protein bS16Family
VA [auth t]IPR020592Small ribosomal subunit protein bS16, conserved siteConserved Site
E [auth C]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
E [auth C]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
E [auth C]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
E [auth C]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
E [auth C]IPR005880Large ribosomal subunit protein uL2, bacterial/organellar-typeFamily
E [auth C]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
E [auth C]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
E [auth C]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
E [auth C]IPR002171Large ribosomal subunit protein uL2Family
YA [auth w]IPR002222Small ribosomal subunit protein uS19Family
YA [auth w]IPR005732Small ribosomal subunit protein uS19, bacterial-typeFamily
YA [auth w]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
YA [auth w]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
F [auth D]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
F [auth D]IPR019927Large ribosomal subunit protein uL3, bacterial/organelle-typeFamily
F [auth D]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
F [auth D]IPR000597Large ribosomal subunit protein uL3Family
G [auth E]IPR013005Large ribosomal subunit protein uL4-likeFamily
G [auth E]IPR002136Large ribosomal subunit protein uL4Family
G [auth E]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
A [auth 1]1MG Parent Component: G

A [auth 1]2MA Parent Component: A

A [auth 1]2MG Parent Component: G

A [auth 1]3TD Parent Component: U

A [auth 1]5MC Parent Component: C

A [auth 1]5MU Parent Component: U

A [auth 1]6MZ Parent Component: A

A [auth 1]G7M Parent Component: G

A [auth 1]OMC Parent Component: C

A [auth 1]OMG Parent Component: G

A [auth 1]OMU Parent Component: U

A [auth 1]PSU Parent Component: U

B [auth 2]2MG Parent Component: G

B [auth 2]4OC Parent Component: C

B [auth 2]5MC Parent Component: C

B [auth 2]G7M Parent Component: G

B [auth 2]MA6 Parent Component: A

B [auth 2]PSU Parent Component: U

B [auth 2]UR3 Parent Component: U

RA [auth p]0TD Parent Component: ASP

BB [auth z]5MU Parent Component: U

BB [auth z]OMG Parent Component: G

CB [auth B]FME Parent Component: MET

RESIDAA0021 , AA0566

PSI-MOD :  N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891