Annotations: 7OFQ

The archaellum of Methanocaldococcus villosus

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: OPM

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
Y	AAA_lid_RFC1	e7ofqY1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
W	AAA_lid_RFC1	e7ofqW1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
U	AAA_lid_RFC1	e7ofqU1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
SA [auth s]	AAA_lid_RFC1	e7ofqs1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
S	AAA_lid_RFC1	e7ofqS1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
QA [auth q]	AAA_lid_RFC1	e7ofqq1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
Q	AAA_lid_RFC1	e7ofqQ1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
OA [auth o]	AAA_lid_RFC1	e7ofqo1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
O	AAA_lid_RFC1	e7ofqO1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
MA [auth m]	AAA_lid_RFC1	e7ofqm1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
M	AAA_lid_RFC1	e7ofqM1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
KA [auth k]	AAA_lid_RFC1	e7ofqk1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
K	AAA_lid_RFC1	e7ofqK1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
IA [auth i]	AAA_lid_RFC1	e7ofqi1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
I	AAA_lid_RFC1	e7ofqI1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
GA [auth g]	AAA_lid_RFC1	e7ofqg1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
G	AAA_lid_RFC1	e7ofqG1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
EA [auth e]	AAA_lid_RFC1	e7ofqe1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
E	AAA_lid_RFC1	e7ofqE1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
CA [auth c]	AAA_lid_RFC1	e7ofqc1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
C	AAA_lid_RFC1	e7ofqC1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
AA [auth a]	AAA_lid_RFC1	e7ofqa1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
A		e7ofqA01	A: alpha arrays	X: Histone-like	H: all-alpha NTP pyrophosphatases	T: Hypothetical protein AF_0060	F:	ECOD (v295)
Z	AAA_lid_RFC1	e7ofqZ1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
X	AAA_lid_RFC1	e7ofqX1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
V	AAA_lid_RFC1	e7ofqV1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
T	AAA_lid_RFC1	e7ofqT1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
RA [auth r]	AAA_lid_RFC1	e7ofqr1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
R	AAA_lid_RFC1	e7ofqR1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
PA [auth p]	AAA_lid_RFC1	e7ofqp1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
P	AAA_lid_RFC1	e7ofqP1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
NA [auth n]	AAA_lid_RFC1	e7ofqn1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
N	AAA_lid_RFC1	e7ofqN1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
LA [auth l]	AAA_lid_RFC1	e7ofql1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
L	AAA_lid_RFC1	e7ofqL1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
JA [auth j]	AAA_lid_RFC1	e7ofqj1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
J	AAA_lid_RFC1	e7ofqJ1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
HA [auth h]	AAA_lid_RFC1	e7ofqh1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
H	AAA_lid_RFC1	e7ofqH1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
FA [auth f]	AAA_lid_RFC1	e7ofqf1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
F	AAA_lid_RFC1	e7ofqF1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
DA [auth d]	AAA_lid_RFC1	e7ofqd1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
D	AAA_lid_RFC1	e7ofqD1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
BA [auth b]	AAA_lid_RFC1	e7ofqb1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
B		e7ofqB01	A: alpha arrays	X: Histone-like	H: all-alpha NTP pyrophosphatases	T: Hypothetical protein AF_0060	F:	ECOD (v295)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, AA [auth a], C, CA [auth c], E, A, AA [auth a], C, CA [auth c], E, EA [auth e], G, GA [auth g], I, IA [auth i], K, KA [auth k], M, MA [auth m], O, OA [auth o], Q, QA [auth q], S, SA [auth s], U, W, Y	Archaellin	structural molecule activity cation binding ion binding binding metal ion binding small molecule binding	cellular process cell motility archaeal or bacterial-type flagellum-dependent cell motility cilium or flagellum-dependent cell motility	archaeal-type flagellum cell projection cellular anatomical structure organelle membraneless organelle
B, BA [auth b], D, DA [auth d], F, B, BA [auth b], D, DA [auth d], F, FA [auth f], H, HA [auth h], J, JA [auth j], L, LA [auth l], N, NA [auth n], P, PA [auth p], R, RA [auth r], T, V, X, Z	Archaellin	structural molecule activity cation binding ion binding binding metal ion binding small molecule binding	cellular process cell motility archaeal or bacterial-type flagellum-dependent cell motility cilium or flagellum-dependent cell motility	archaeal-type flagellum cell projection cellular anatomical structure organelle membraneless organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, AA [auth a], C, CA [auth c], E, A, AA [auth a], C, CA [auth c], E, EA [auth e], G, GA [auth g], I, IA [auth i], K, KA [auth k], M, MA [auth m], O, OA [auth o], Q, QA [auth q], S, SA [auth s], U, W, Y	IPR013373	Flagellin/pilin, N-terminal site, archaea	Conserved Site
A, AA [auth a], C, CA [auth c], E, A, AA [auth a], C, CA [auth c], E, EA [auth e], G, GA [auth g], I, IA [auth i], K, KA [auth k], M, MA [auth m], O, OA [auth o], Q, QA [auth q], S, SA [auth s], U, W, Y	IPR002774	Flagellin, archaeal-type	Family
B, BA [auth b], D, DA [auth d], F, B, BA [auth b], D, DA [auth d], F, FA [auth f], H, HA [auth h], J, JA [auth j], L, LA [auth l], N, NA [auth n], P, PA [auth p], R, RA [auth r], T, V, X, Z	IPR013373	Flagellin/pilin, N-terminal site, archaea	Conserved Site
B, BA [auth b], D, DA [auth d], F, B, BA [auth b], D, DA [auth d], F, FA [auth f], H, HA [auth h], J, JA [auth j], L, LA [auth l], N, NA [auth n], P, PA [auth p], R, RA [auth r], T, V, X, Z	IPR002774	Flagellin, archaeal-type	Family

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
A, AA [auth a], B, BA [auth b], C A, AA [auth a], B, BA [auth b], C, CA [auth c], D, DA [auth d], E, EA [auth e], F, FA [auth f], G, GA [auth g], H, HA [auth h], I, IA [auth i], J, JA [auth j], K, KA [auth k], L, LA [auth l], M, MA [auth m], N, NA [auth n], O, OA [auth o], P, PA [auth p], Q, QA [auth q], R, RA [auth r], S, SA [auth s], T, U, V, W, X, Y, Z	OPM	Peptides	Alpha-helical peptides	Designed alpha-helical peptides	Basic amphiphilic peptides

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

7OFQ | pdb_00007ofq

The archaellum of Methanocaldococcus villosus

External Resource: Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage

Membrane Protein Annotation: OPM OPM Database Homepage