7OD1
Crystal structure of RBR ubiquitin ligase ARIH2
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | F_UNCLASSIFIED | e7od1A5 | A: alpha arrays | X: RuvA-C | H: RuvA-C, UBA, CRAL/TRIO-N, HBS1 (From Topology) | T: RuvA-C, UBA, CRAL/TRIO-N, HBS1 | F: F_UNCLASSIFIED | ECOD (1.6) |
A | PF19422 | e7od1A1 | A: alpha bundles | X: N-cbl like | H: C-terminal domain of E3 ubiquitin-protein ligase ARIH1 (From Topology) | T: C-terminal domain of E3 ubiquitin-protein ligase ARIH1 | F: PF19422 | ECOD (1.6) |
A | PF00097 | e7od1A4 | A: few secondary structure elements | X: RING/U-box-like | H: RING/U-box-like | T: RING/U-box | F: PF00097 | ECOD (1.6) |
A | PF22191 | e7od1A2 | A: few secondary structure elements | X: RING/U-box-like | H: RING/U-box-like | T: Ariadne-1 protein homolog | F: PF22191 | ECOD (1.6) |
A | PF01485 | e7od1A3 | A: few secondary structure elements | X: RING/U-box-like | H: RING/U-box-like | T: IBR domain | F: PF01485 | ECOD (1.6) |
B | F_UNCLASSIFIED | e7od1B5 | A: alpha arrays | X: RuvA-C | H: RuvA-C, UBA, CRAL/TRIO-N, HBS1 (From Topology) | T: RuvA-C, UBA, CRAL/TRIO-N, HBS1 | F: F_UNCLASSIFIED | ECOD (1.6) |
B | PF19422 | e7od1B1 | A: alpha bundles | X: N-cbl like | H: C-terminal domain of E3 ubiquitin-protein ligase ARIH1 (From Topology) | T: C-terminal domain of E3 ubiquitin-protein ligase ARIH1 | F: PF19422 | ECOD (1.6) |
B | PF00097 | e7od1B4 | A: few secondary structure elements | X: RING/U-box-like | H: RING/U-box-like | T: RING/U-box | F: PF00097 | ECOD (1.6) |
B | PF22191 | e7od1B2 | A: few secondary structure elements | X: RING/U-box-like | H: RING/U-box-like | T: Ariadne-1 protein homolog | F: PF22191 | ECOD (1.6) |
B | PF01485 | e7od1B3 | A: few secondary structure elements | X: RING/U-box-like | H: RING/U-box-like | T: IBR domain | F: PF01485 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF19422 | Ariadne domain (Ariadne) | Ariadne domain | This entry represents the Ariadne domain found in the Ariadne subfamily E3 ubiquitin ligase proteins [4]. The C-terminal Ariadne domain adopts an elongated four-helix bundle consisting of an antiparallel arrangement of seven-to-ten-turn long helices. ... | Domain | |
PF00097 | Zinc finger, C3HC4 type (RING finger) (zf-C3HC4) | Zinc finger, C3HC4 type (RING finger) | The C3HC4 type zinc-finger (RING finger) is a cysteine-rich domain of 40 to 60 residues that coordinates two zinc ions, and has the consensus sequence: C-X2-C-X(9-39)-C-X(1-3)-H-X(2-3)-C-X2-C-X(4-48)-C-X2-C where X is any amino acid [1]. Many protein ... | Domain | |
PF01485 | IBR domain, a half RING-finger domain (IBR) | IBR domain, a half RING-finger domain | The IBR (In Between Ring fingers) domain is often found to occur between pairs of ring fingers (Pfam:PF00097). This domain has also been called the C6HC domain and DRIL (for double RING finger linked) domain [2]. Proteins that contain two Ring fing ... | Domain | |
PF22191 | IBR domain (IBR_1) | IBR domain | This entry represents an IBR domain, related to Pfam:PF01485. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR002867 | IBR domain | Domain | |
IPR044066 | TRIAD supradomain | Domain | |
IPR047555 | E3 ubiquitin-protein ligase ARIH2, BRcat domain | Domain | |
IPR045840 | Ariadne domain | Domain | |
IPR017907 | Zinc finger, RING-type, conserved site | Conserved Site | |
IPR013083 | Zinc finger, RING/FYVE/PHD-type | Homologous Superfamily | |
IPR031127 | E3 ubiquitin ligase RBR family | Family | |
IPR047556 | E3 ubiquitin-protein ligase TRIAD1, Rcat domain | Domain | |
IPR001841 | Zinc finger, RING-type | Domain |
Pharos: Disease Associations Pharos Homepage Annotation
Chains | Drug Target   | Associated Disease |
---|---|---|
O95376 | :