Skip to main content

 7N67 | pdb_00007n67

Crystal structure of HCAN_0198, a 3,4-ketoisomerase from Helicobacter canadensis

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Bd7n67b1 All beta proteins Double-stranded beta-helix RmlC-like cupins automated matches automated matches (Helicobacter canadensis MIT 98-5491 ) [TaxId: 537970 ], SCOPe (2.08)
Bd7n67b2 Artifacts Tags Tags Tags N-terminal Tags (Helicobacter canadensis MIT 98-5491 ) [TaxId: 537970 ], SCOPe (2.08)
Ad7n67a1 All beta proteins Double-stranded beta-helix RmlC-like cupins automated matches automated matches (Helicobacter canadensis MIT 98-5491 ) [TaxId: 537970 ], SCOPe (2.08)
Ad7n67a2 Artifacts Tags Tags Tags N-terminal Tags (Helicobacter canadensis MIT 98-5491 ) [TaxId: 537970 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2 FamilydTDP-sugar isomerase 8103313 4002863 SCOP2 (2022-06-29)
BSCOP2 SuperfamilyRmlC-like cupins 8103314 3001825 SCOP2 (2022-06-29)
ASCOP2B SuperfamilyRmlC-like cupins 8103314 3001825 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BV-sete7n67B1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: V-setECOD (v295.2)
ARibosomal_L12_Ne7n67A1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: Ribosomal_L12_NECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF05523WxcM-like, C-terminal (FdtA)WxcM-like, C-terminalThis family includes FdtA (Swiss:Q6T1W8) from Aneurinibacillus thermoaerophilus, which has been characterised as a dtdp-6-deoxy-3,4-keto-hexulose isomerase [1]. It also includes WxcM (Swiss:Q93S92) from Xanthomonas campestris (pv. campestris) [2]. Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR008894Sugar 3,4-ketoisomerase QdtA, cupin domainDomain
A, B
IPR014710PpnP-like, jelly roll foldHomologous Superfamily
A, B
IPR011051RmlC-like cupin domain superfamilyHomologous Superfamily