7MX5
Crystal structure of TolB from Acinetobacter baumannii
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d7mx5a2 | All beta proteins | 6-bladed beta-propeller | TolB, C-terminal domain | automated matches | automated matches | (Acinetobacter baumannii ) [TaxId: 470 ], | SCOPe (2.08) |
A | d7mx5a1 | Alpha and beta proteins (a/b) | Anticodon-binding domain-like | TolB, N-terminal domain | automated matches | automated matches | (Acinetobacter baumannii ) [TaxId: 470 ], | SCOPe (2.08) |
A | d7mx5a3 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Acinetobacter baumannii ) [TaxId: 470 ], | SCOPe (2.08) |
B | d7mx5b2 | All beta proteins | 6-bladed beta-propeller | TolB, C-terminal domain | automated matches | automated matches | (Acinetobacter baumannii ) [TaxId: 470 ], | SCOPe (2.08) |
B | d7mx5b1 | Alpha and beta proteins (a/b) | Anticodon-binding domain-like | TolB, N-terminal domain | automated matches | automated matches | (Acinetobacter baumannii ) [TaxId: 470 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | DPPIV_N_1 | e7mx5A1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 6-bladed | F: DPPIV_N_1 | ECOD (1.6) |
A | TolB_N | e7mx5A2 | A: a/b three-layered sandwiches | X: TolB, N-terminal domain (From Topology) | H: TolB, N-terminal domain (From Topology) | T: TolB, N-terminal domain | F: TolB_N | ECOD (1.6) |
B | DPPIV_N_1 | e7mx5B2 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 6-bladed | F: DPPIV_N_1 | ECOD (1.6) |
B | TolB_N | e7mx5B1 | A: a/b three-layered sandwiches | X: TolB, N-terminal domain (From Topology) | H: TolB, N-terminal domain (From Topology) | T: TolB, N-terminal domain | F: TolB_N | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF04052 | TolB amino-terminal domain (TolB_N) | TolB amino-terminal domain | TolB is an essential periplasmic component of the tol-dependent translocation system. This function of this amino terminal domain is uncertain. | Domain | |
PF07676 | WD40-like Beta Propeller Repeat (PD40) | WD40-like Beta Propeller Repeat | - | Repeat |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Tol-Pal system protein TolB | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR011042 | Six-bladed beta-propeller, TolB-like | Homologous Superfamily | |
IPR011659 | WD40-like beta propeller | Repeat | |
IPR007195 | TolB, N-terminal | Domain | |
IPR014167 | Tol-Pal system protein TolB | Family |