7MUD | pdb_00007mud

Legionella pneumophila Dot/Icm T4SS OMC


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
D [auth AK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
HA [auth DK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
PC [auth JK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
VB [auth HK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
ZC [auth KK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
X [auth CK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
TD [auth MK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
RA [auth EK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
N [auth BK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
LB [auth GK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
JD [auth LK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
FC [auth IK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
BB [auth FK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
GC [auth IL]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
Y [auth CL]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
WB [auth HL]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
UD [auth ML]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
SA [auth EL]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
QC [auth JL]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
O [auth BL]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
MB [auth GL]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
KD [auth LL]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
IA [auth DL]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
E [auth AL]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
CB [auth FL]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
AD [auth KL]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
D [auth AK]Secretin_Ne7mudAK1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
HA [auth DK]Secretin_Ne7mudDK1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
PC [auth JK]Secretin_Ne7mudJK1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
VB [auth HK]Secretin_Ne7mudHK1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
ZC [auth KK]Secretin_Ne7mudKK1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
X [auth CK]Secretin_Ne7mudCK1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
TD [auth MK]Secretin_Ne7mudMK1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
RA [auth EK]Secretin_Ne7mudEK1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
N [auth BK]Secretin_Ne7mudBK1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
LB [auth GK]Secretin_Ne7mudGK1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
JD [auth LK]Secretin_Ne7mudLK1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
FC [auth IK]Secretin_Ne7mudIK1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
BB [auth FK]Secretin_Ne7mudFK1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
GC [auth IL]Secretin_Ne7mudIL1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
Y [auth CL]Secretin_Ne7mudCL1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
WB [auth HL]Secretin_Ne7mudHL1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
UD [auth ML]Secretin_Ne7mudML1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
SA [auth EL]Secretin_Ne7mudEL1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
QC [auth JL]Secretin_Ne7mudJL1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
O [auth BL]Secretin_Ne7mudBL1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
MB [auth GL]Secretin_Ne7mudGL1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
KD [auth LL]Secretin_Ne7mudLL1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
IA [auth DL]Secretin_Ne7mudDL1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
E [auth AL]Secretin_Ne7mudAL1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
CB [auth FL]Secretin_Ne7mudFL1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
AD [auth KL]Secretin_Ne7mudKL1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
B [auth AD]AAA_lid_RFC1e7mudAD1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
I [auth Ad]AAA_lid_RFC1e7mudAd1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
JB [auth GD]AAA_lid_RFC1e7mudGD1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
NC [auth JD]AAA_lid_RFC1e7mudJD1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
PA [auth ED]AAA_lid_RFC1e7mudED1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
QB [auth Gd]AAA_lid_RFC1e7mudGd1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
XC [auth KD]AAA_lid_RFC1e7mudKD1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
YD [auth Md]AAA_lid_RFC1e7mudMd1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
ZA [auth FD]AAA_lid_RFC1e7mudFD1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
WA [auth Ed]AAA_lid_RFC1e7mudEd1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
V [auth CD]AAA_lid_RFC1e7mudCD1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
UC [auth Jd]AAA_lid_RFC1e7mudJd1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
TB [auth HD]AAA_lid_RFC1e7mudHD1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
S [auth Bd]AAA_lid_RFC1e7mudBd1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
RD [auth MD]AAA_lid_RFC1e7mudMD1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
OD [auth Ld]AAA_lid_RFC1e7mudLd1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
MA [auth Dd]AAA_lid_RFC1e7mudDd1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
L [auth BD]AAA_lid_RFC1e7mudBD1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
KC [auth Id]AAA_lid_RFC1e7mudId1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
HD [auth LD]AAA_lid_RFC1e7mudLD1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
GB [auth Fd]AAA_lid_RFC1e7mudFd1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
FA [auth DD]AAA_lid_RFC1e7mudDD1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
ED [auth Kd]AAA_lid_RFC1e7mudKd1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
DC [auth ID]AAA_lid_RFC1e7mudID1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
CA [auth Cd]AAA_lid_RFC1e7mudCd1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
AC [auth Hd]AAA_lid_RFC1e7mudHd1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Inner membrane lipoprotein YiaD- -
DotF- - -
Unknown protein fragment---
Neurogenic locus notch---
DUF2807 domain-containing protein---
Outer membrane protein, OmpA family protein- -
Type IV secretion protein IcmK---
DotD- - -
DotC- - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR006665OmpA-like domainDomain
IPR050330Bacterial Outer Membrane Structural/FunctionalFamily
IPR036737OmpA-like domain superfamilyHomologous Superfamily
IPR006665OmpA-like domainDomain
IPR027367YMGG-like Gly-zipperDomain
IPR050330Bacterial Outer Membrane Structural/FunctionalFamily
IPR036737OmpA-like domain superfamilyHomologous Superfamily
IPR038140DotD superfamilyHomologous Superfamily
IPR031817DotD proteinFamily
IPR031618Putative type IV secretory system proteinFamily