7MUC
Legionella pneumophila Dot/Icm T4SS C1 Reconstruction
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
F [auth AK] | SCOP2B Superfamily | OmpA-like | 8098176 | 3001650 | SCOP2B (2022-06-29) |
FA [auth CK] | SCOP2B Superfamily | OmpA-like | 8098176 | 3001650 | SCOP2B (2022-06-29) |
FB [auth EK] | SCOP2B Superfamily | OmpA-like | 8098176 | 3001650 | SCOP2B (2022-06-29) |
FC [auth GK] | SCOP2B Superfamily | OmpA-like | 8098176 | 3001650 | SCOP2B (2022-06-29) |
FD [auth IK] | SCOP2B Superfamily | OmpA-like | 8098176 | 3001650 | SCOP2B (2022-06-29) |
FE [auth KK] | SCOP2B Superfamily | OmpA-like | 8098176 | 3001650 | SCOP2B (2022-06-29) |
FF [auth MK] | SCOP2B Superfamily | OmpA-like | 8098176 | 3001650 | SCOP2B (2022-06-29) |
S [auth BK] | SCOP2B Superfamily | OmpA-like | 8098176 | 3001650 | SCOP2B (2022-06-29) |
SA [auth DK] | SCOP2B Superfamily | OmpA-like | 8098176 | 3001650 | SCOP2B (2022-06-29) |
SB [auth FK] | SCOP2B Superfamily | OmpA-like | 8098176 | 3001650 | SCOP2B (2022-06-29) |
SC [auth HK] | SCOP2B Superfamily | OmpA-like | 8098176 | 3001650 | SCOP2B (2022-06-29) |
SD [auth JK] | SCOP2B Superfamily | OmpA-like | 8098176 | 3001650 | SCOP2B (2022-06-29) |
SE [auth LK] | SCOP2B Superfamily | OmpA-like | 8098176 | 3001650 | SCOP2B (2022-06-29) |
G [auth AL] | SCOP2B Superfamily | OmpA-like | 8074167 | 3001650 | SCOP2B (2022-06-29) |
GA [auth CL] | SCOP2B Superfamily | OmpA-like | 8074167 | 3001650 | SCOP2B (2022-06-29) |
GB [auth EL] | SCOP2B Superfamily | OmpA-like | 8074167 | 3001650 | SCOP2B (2022-06-29) |
GC [auth GL] | SCOP2B Superfamily | OmpA-like | 8074167 | 3001650 | SCOP2B (2022-06-29) |
GD [auth IL] | SCOP2B Superfamily | OmpA-like | 8074167 | 3001650 | SCOP2B (2022-06-29) |
GE [auth KL] | SCOP2B Superfamily | OmpA-like | 8074167 | 3001650 | SCOP2B (2022-06-29) |
GF [auth ML] | SCOP2B Superfamily | OmpA-like | 8074167 | 3001650 | SCOP2B (2022-06-29) |
T [auth BL] | SCOP2B Superfamily | OmpA-like | 8074167 | 3001650 | SCOP2B (2022-06-29) |
TA [auth DL] | SCOP2B Superfamily | OmpA-like | 8074167 | 3001650 | SCOP2B (2022-06-29) |
TB [auth FL] | SCOP2B Superfamily | OmpA-like | 8074167 | 3001650 | SCOP2B (2022-06-29) |
TC [auth HL] | SCOP2B Superfamily | OmpA-like | 8074167 | 3001650 | SCOP2B (2022-06-29) |
TD [auth JL] | SCOP2B Superfamily | OmpA-like | 8074167 | 3001650 | SCOP2B (2022-06-29) |
TE [auth LL] | SCOP2B Superfamily | OmpA-like | 8074167 | 3001650 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
F [auth AK] | OmpA | e7mucAK1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: OmpA | ECOD (1.6) |
FA [auth CK] | OmpA | e7mucCK1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: OmpA | ECOD (1.6) |
FB [auth EK] | OmpA | e7mucEK1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: OmpA | ECOD (1.6) |
FC [auth GK] | OmpA | e7mucGK1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: OmpA | ECOD (1.6) |
FD [auth IK] | OmpA | e7mucIK1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: OmpA | ECOD (1.6) |
FE [auth KK] | OmpA | e7mucKK1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: OmpA | ECOD (1.6) |
FF [auth MK] | OmpA | e7mucMK1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: OmpA | ECOD (1.6) |
S [auth BK] | OmpA | e7mucBK1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: OmpA | ECOD (1.6) |
SA [auth DK] | OmpA | e7mucDK1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: OmpA | ECOD (1.6) |
SB [auth FK] | OmpA | e7mucFK1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: OmpA | ECOD (1.6) |
SC [auth HK] | OmpA | e7mucHK1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: OmpA | ECOD (1.6) |
SD [auth JK] | OmpA | e7mucJK1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: OmpA | ECOD (1.6) |
SE [auth LK] | OmpA | e7mucLK1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: OmpA | ECOD (1.6) |
G [auth AL] | OmpA | e7mucAL1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: OmpA | ECOD (1.6) |
GA [auth CL] | OmpA | e7mucCL1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: OmpA | ECOD (1.6) |
GB [auth EL] | OmpA | e7mucEL1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: OmpA | ECOD (1.6) |
GC [auth GL] | OmpA | e7mucGL1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: OmpA | ECOD (1.6) |
GD [auth IL] | OmpA | e7mucIL1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: OmpA | ECOD (1.6) |
GE [auth KL] | OmpA | e7mucKL1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: OmpA | ECOD (1.6) |
GF [auth ML] | OmpA | e7mucML1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: OmpA | ECOD (1.6) |
T [auth BL] | OmpA | e7mucBL1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: OmpA | ECOD (1.6) |
TA [auth DL] | OmpA | e7mucDL1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: OmpA | ECOD (1.6) |
TB [auth FL] | OmpA | e7mucFL1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: OmpA | ECOD (1.6) |
TC [auth HL] | OmpA | e7mucHL1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: OmpA | ECOD (1.6) |
TD [auth JL] | OmpA | e7mucJL1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: OmpA | ECOD (1.6) |
TE [auth LL] | OmpA | e7mucLL1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: OmpA-like (From Topology) | T: OmpA-like | F: OmpA | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF16816 | DotD protein (DotD) | DotD protein | The DotD protein is a component of the Dot/Icm type IVB secretion system. It is involved in the outer membrane targeting of DotH [1]. | Domain | |
PF00691 | OmpA family (OmpA) | OmpA family | - | Family | |
PF00691 | OmpA family (OmpA) | OmpA family | - | Family | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
DotC | - | - | - | |
Unknown protein fragment | - | - | - | |
Unknown protein fragment | - | - | - | |
DotD | - | - | - | |
DotF | - | - | ||
IcmE protein | - | - | ||
Type IV secretion protein IcmK | - | - | - | |
Inner membrane lipoprotein YiaD | - | - | ||
Outer membrane protein, OmpA family protein | - | - | ||
DUF2807 domain-containing protein | - | - | - | |
Neurogenic locus notch | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR031618 | Putative type IV secretory system protein | Family | |
IPR038140 | DotD superfamily | Homologous Superfamily | |
IPR031817 | DotD protein | Family | |
IPR053285 | Thylakoid lumenal pentapeptide repeat protein | Family | |
IPR042217 | Type IV secretion system, VirB10/TrbI | Homologous Superfamily | |
IPR049855 | DotG/IcmE-like, C-terminal domain | Domain | |
IPR001646 | Pentapeptide repeat | Repeat | |
IPR005498 | Type IV secretion system, VirB10/TraB/TrbI | Family | |
IPR006665 | OmpA-like domain | Domain | |
IPR050330 | Bacterial Outer Membrane Structural/Functional | Family | |
IPR036737 | OmpA-like domain superfamily | Homologous Superfamily | |
IPR006665 | OmpA-like domain | Domain | |
IPR050330 | Bacterial Outer Membrane Structural/Functional | Family | |
IPR036737 | OmpA-like domain superfamily | Homologous Superfamily |