7MTZ | pdb_00007mtz

Structure of the adeno-associated virus 9 capsid at pH pH 7.4 in complex with terminal galactose

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
ZA [auth t]	14-3-3	e7mtzt1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
Z	14-3-3	e7mtzZ1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
YA [auth s]	14-3-3	e7mtzs1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
Y	14-3-3	e7mtzY1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
XA [auth r]	14-3-3	e7mtzr1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
X	14-3-3	e7mtzX1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
WA [auth q]	14-3-3	e7mtzq1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
W	14-3-3	e7mtzW1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
VA [auth p]	14-3-3	e7mtzp1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
V	14-3-3	e7mtzV1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
UA [auth o]	14-3-3	e7mtzo1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
U	14-3-3	e7mtzU1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
TA [auth n]	14-3-3	e7mtzn1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
T	14-3-3	e7mtzT1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
SA [auth m]	14-3-3	e7mtzm1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
S	14-3-3	e7mtzS1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
RA [auth l]	14-3-3	e7mtzl1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
R	14-3-3	e7mtzR1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
QA [auth k]	14-3-3	e7mtzk1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
Q	14-3-3	e7mtzQ1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
PA [auth j]	14-3-3	e7mtzj1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
P	14-3-3	e7mtzP1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
OA [auth i]	14-3-3	e7mtzi1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
O	14-3-3	e7mtzO1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
NA [auth h]	14-3-3	e7mtzh1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
N	14-3-3	e7mtzN1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
MA [auth g]	14-3-3	e7mtzg1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
M	14-3-3	e7mtzM1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
LA [auth f]	14-3-3	e7mtzf1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
L	14-3-3	e7mtzL1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
KA [auth e]	14-3-3	e7mtze1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
K	14-3-3	e7mtzK1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
JA [auth d]	14-3-3	e7mtzd1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
J	14-3-3	e7mtzJ1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
IA [auth c]	14-3-3	e7mtzc1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
I	14-3-3	e7mtzI1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
HB [auth 8]	14-3-3	e7mtz81	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
HA [auth b]	14-3-3	e7mtzb1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
H	14-3-3	e7mtzH1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
GB [auth 7]	14-3-3	e7mtz71	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
GA [auth a]	14-3-3	e7mtza1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
G	14-3-3	e7mtzG1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
FB [auth z]	14-3-3	e7mtzz1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
FA [auth 6]	14-3-3	e7mtz61	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
F	14-3-3	e7mtzF1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
EB [auth y]	14-3-3	e7mtzy1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
EA [auth 5]	14-3-3	e7mtz51	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
E	14-3-3	e7mtzE1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
DB [auth x]	14-3-3	e7mtzx1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
DA [auth 4]	14-3-3	e7mtz41	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
D	14-3-3	e7mtzD1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
CB [auth w]	14-3-3	e7mtzw1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
CA [auth 3]	14-3-3	e7mtz31	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
C	14-3-3	e7mtzC1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
BB [auth v]	14-3-3	e7mtzv1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
BA [auth 2]	14-3-3	e7mtz21	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
B	14-3-3	e7mtzB1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
AB [auth u]	14-3-3	e7mtzu1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
AA [auth 1]	14-3-3	e7mtz11	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
A	Acetyltransf_1	e7mtzA1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: Acetyltransf_1	ECOD (v294.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, AA [auth 1], AB [auth u], B, BA [auth 2], A, AA [auth 1], AB [auth u], B, BA [auth 2], BB [auth v], C, CA [auth 3], CB [auth w], D, DA [auth 4], DB [auth x], E, EA [auth 5], EB [auth y], F, FA [auth 6], FB [auth z], G, GA [auth a], GB [auth 7], H, HA [auth b], HB [auth 8], I, IA [auth c], J, JA [auth d], K, KA [auth e], L, LA [auth f], M, MA [auth g], N, NA [auth h], O, OA [auth i], P, PA [auth j], Q, QA [auth k], R, RA [auth l], S, SA [auth m], T, TA [auth n], U, UA [auth o], V, VA [auth p], W, WA [auth q], X, XA [auth r], Y, YA [auth s], Z, ZA [auth t]	Capsid protein VP1	structural molecule activity	-	viral capsid icosahedral viral capsid virion component T=1 icosahedral viral capsid

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, AA [auth 1], AB [auth u], B, BA [auth 2], A, AA [auth 1], AB [auth u], B, BA [auth 2], BB [auth v], C, CA [auth 3], CB [auth w], D, DA [auth 4], DB [auth x], E, EA [auth 5], EB [auth y], F, FA [auth 6], FB [auth z], G, GA [auth a], GB [auth 7], H, HA [auth b], HB [auth 8], I, IA [auth c], J, JA [auth d], K, KA [auth e], L, LA [auth f], M, MA [auth g], N, NA [auth h], O, OA [auth i], P, PA [auth j], Q, QA [auth k], R, RA [auth l], S, SA [auth m], T, TA [auth n], U, UA [auth o], V, VA [auth p], W, WA [auth q], X, XA [auth r], Y, YA [auth s], Z, ZA [auth t]	IPR013607	Phospholipase A2-like domain	Domain
A, AA [auth 1], AB [auth u], B, BA [auth 2], A, AA [auth 1], AB [auth u], B, BA [auth 2], BB [auth v], C, CA [auth 3], CB [auth w], D, DA [auth 4], DB [auth x], E, EA [auth 5], EB [auth y], F, FA [auth 6], FB [auth z], G, GA [auth a], GB [auth 7], H, HA [auth b], HB [auth 8], I, IA [auth c], J, JA [auth d], K, KA [auth e], L, LA [auth f], M, MA [auth g], N, NA [auth h], O, OA [auth i], P, PA [auth j], Q, QA [auth k], R, RA [auth l], S, SA [auth m], T, TA [auth n], U, UA [auth o], V, VA [auth p], W, WA [auth q], X, XA [auth r], Y, YA [auth s], Z, ZA [auth t]	IPR016184	Capsid/spike protein, ssDNA virus	Homologous Superfamily
A, AA [auth 1], AB [auth u], B, BA [auth 2], A, AA [auth 1], AB [auth u], B, BA [auth 2], BB [auth v], C, CA [auth 3], CB [auth w], D, DA [auth 4], DB [auth x], E, EA [auth 5], EB [auth y], F, FA [auth 6], FB [auth z], G, GA [auth a], GB [auth 7], H, HA [auth b], HB [auth 8], I, IA [auth c], J, JA [auth d], K, KA [auth e], L, LA [auth f], M, MA [auth g], N, NA [auth h], O, OA [auth i], P, PA [auth j], Q, QA [auth k], R, RA [auth l], S, SA [auth m], T, TA [auth n], U, UA [auth o], V, VA [auth p], W, WA [auth q], X, XA [auth r], Y, YA [auth s], Z, ZA [auth t]	IPR001403	Coat protein VP1/VP2, Parvovirus	Domain
A, AA [auth 1], AB [auth u], B, BA [auth 2], A, AA [auth 1], AB [auth u], B, BA [auth 2], BB [auth v], C, CA [auth 3], CB [auth w], D, DA [auth 4], DB [auth x], E, EA [auth 5], EB [auth y], F, FA [auth 6], FB [auth z], G, GA [auth a], GB [auth 7], H, HA [auth b], HB [auth 8], I, IA [auth c], J, JA [auth d], K, KA [auth e], L, LA [auth f], M, MA [auth g], N, NA [auth h], O, OA [auth i], P, PA [auth j], Q, QA [auth k], R, RA [auth l], S, SA [auth m], T, TA [auth n], U, UA [auth o], V, VA [auth p], W, WA [auth q], X, XA [auth r], Y, YA [auth s], Z, ZA [auth t]	IPR036952	Parvovirus coat protein VP1/VP2	Homologous Superfamily

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.