7MFM | pdb_00007mfm

Glutamate synthase, glutamate dehydrogenase counter-enzyme complex

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
J [auth F]	SCOP2B Superfamily	MtdA-like	8106008	3000046	SCOP2B (2022-06-29)
I [auth E]	SCOP2B Superfamily	MtdA-like	8106008	3000046	SCOP2B (2022-06-29)
H [auth D]	SCOP2B Superfamily	MtdA-like	8106008	3000046	SCOP2B (2022-06-29)
G [auth C]	SCOP2 Family	Aminoacid dehydrogenase-like	8106007	4000004	SCOP2 (2022-06-29)
G [auth C]	SCOP2 Superfamily	MtdA-like	8106008	3000046	SCOP2 (2022-06-29)
F [auth B]	SCOP2B Superfamily	MtdA-like	8106008	3000046	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	MtdA-like	8106008	3000046	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
E [auth J]	Glyco_transf_41	e7mfmJ1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Glyco_transf_41	ECOD (v294.2)
D [auth I]	Ion_trans	e7mfmI1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ion_trans	ECOD (v294.2)
C [auth H]	Secretin_N	e7mfmH1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Secretin_N	ECOD (v294.2)
B [auth G]	Secretin_N	e7mfmG1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Secretin_N	ECOD (v294.2)
J [auth F]	Secretin_N	e7mfmF1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Secretin_N	ECOD (v294.2)
I [auth E]	Secretin_N	e7mfmE1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Secretin_N	ECOD (v294.2)
H [auth D]	Secretin_N	e7mfmD1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Secretin_N	ECOD (v294.2)
G [auth C]	Secretin_N	e7mfmC1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Secretin_N	ECOD (v294.2)
F [auth B]	Secretin_N	e7mfmB1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Secretin_N	ECOD (v294.2)
A	Secretin_N	e7mfmA1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Secretin_N	ECOD (v294.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
D [auth I], E [auth J]	Glutamate synthase (NADPH) small chain	-	-	-
B [auth G], C [auth H]	Glutamate synthase (NADPH) large chain	-	-	-
A, F [auth B], G [auth C], H [auth D], I [auth E], A, F [auth B], G [auth C], H [auth D], I [auth E], J [auth F]	Glutamate dehydrogenase	oxidoreductase activity, acting on the CH-NH2 group of donors amino-acid dehydrogenase [NAD(P)+] activity oxidoreductase activity L-glutamate dehydrogenase [NAD(P)+] activity L-glutamate dehydrogenase (NAD+) activity oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor catalytic activity binding nucleoside phosphate binding nucleotide binding heterocyclic compound binding small molecule binding	catabolic process oxoacid metabolic process amino acid metabolic process organic acid catabolic process organic acid metabolic process dicarboxylic acid catabolic process alpha-amino acid metabolic process carboxylic acid catabolic process glutamate metabolic process small molecule metabolic process amino acid catabolic process L-glutamate catabolic process dicarboxylic acid metabolic process L-amino acid catabolic process catabolic process oxoacid metabolic process amino acid metabolic process organic acid catabolic process organic acid metabolic process dicarboxylic acid catabolic process alpha-amino acid metabolic process carboxylic acid catabolic process glutamate metabolic process small molecule metabolic process amino acid catabolic process L-glutamate catabolic process dicarboxylic acid metabolic process L-amino acid catabolic process carboxylic acid metabolic process primary metabolic process L-amino acid metabolic process proteinogenic amino acid metabolic process alpha-amino acid catabolic process proteinogenic amino acid catabolic process metabolic process cellular process small molecule catabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, F [auth B], G [auth C], H [auth D], I [auth E], A, F [auth B], G [auth C], H [auth D], I [auth E], J [auth F]	IPR006095	Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase	Family
A, F [auth B], G [auth C], H [auth D], I [auth E], A, F [auth B], G [auth C], H [auth D], I [auth E], J [auth F]	IPR036291	NAD(P)-binding domain superfamily	Homologous Superfamily
A, F [auth B], G [auth C], H [auth D], I [auth E], A, F [auth B], G [auth C], H [auth D], I [auth E], J [auth F]	IPR046346	Aminoacid dehydrogenase-like, N-terminal domain superfamily	Homologous Superfamily
A, F [auth B], G [auth C], H [auth D], I [auth E], A, F [auth B], G [auth C], H [auth D], I [auth E], J [auth F]	IPR033922	NAD(P) binding domain of glutamate dehydrogenase	Domain
A, F [auth B], G [auth C], H [auth D], I [auth E], A, F [auth B], G [auth C], H [auth D], I [auth E], J [auth F]	IPR006096	Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal	Domain
A, F [auth B], G [auth C], H [auth D], I [auth E], A, F [auth B], G [auth C], H [auth D], I [auth E], J [auth F]	IPR006097	Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, dimerisation domain	Domain
A, F [auth B], G [auth C], H [auth D], I [auth E], A, F [auth B], G [auth C], H [auth D], I [auth E], J [auth F]	IPR014362	Glutamate dehydrogenase	Family
A, F [auth B], G [auth C], H [auth D], I [auth E], A, F [auth B], G [auth C], H [auth D], I [auth E], J [auth F]	IPR033524	Leu/Phe/Val dehydrogenases active site	Active Site

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.