Annotations: 7LXB

HeLa-tubulin in complex with cryptophycin 52

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
P	Utp12	e7lxbP1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Utp12	ECOD (v294.2)
N	Utp12	e7lxbN1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Utp12	ECOD (v294.2)
L	Utp12	e7lxbL1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Utp12	ECOD (v294.2)
J	Utp12	e7lxbJ1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Utp12	ECOD (v294.2)
H	Utp12	e7lxbH1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Utp12	ECOD (v294.2)
F	Utp12	e7lxbF1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Utp12	ECOD (v294.2)
D	Utp12	e7lxbD1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Utp12	ECOD (v294.2)
B	ABC2_membrane	e7lxbB1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: ABC2_membrane	ECOD (v294.2)
O	Utp12	e7lxbO1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Utp12	ECOD (v294.2)
M	Utp12	e7lxbM1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Utp12	ECOD (v294.2)
K	Utp12	e7lxbK1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Utp12	ECOD (v294.2)
I	Utp12	e7lxbI1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Utp12	ECOD (v294.2)
G	Utp12	e7lxbG1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Utp12	ECOD (v294.2)
E	Utp12	e7lxbE1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Utp12	ECOD (v294.2)
C	Utp12	e7lxbC1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Utp12	ECOD (v294.2)
A	ABC2_membrane	e7lxbA1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: ABC2_membrane	ECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
P	3.40.50.1440	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Tubulin/FtsZ, GTPase domain	CATH (utative)
P	3.30.1330.20	Alpha Beta	2-Layer Sandwich	60s Ribosomal Protein L30	Chain: A	CATH (utative)
P	1.10.287.600	Mainly Alpha	Orthogonal Bundle	Helix Hairpins	Helix hairpin bin	CATH (utative)
N	3.40.50.1440	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Tubulin/FtsZ, GTPase domain	CATH (utative)
N	3.30.1330.20	Alpha Beta	2-Layer Sandwich	60s Ribosomal Protein L30	Chain: A	CATH (utative)
N	1.10.287.600	Mainly Alpha	Orthogonal Bundle	Helix Hairpins	Helix hairpin bin	CATH (utative)
L	3.40.50.1440	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Tubulin/FtsZ, GTPase domain	CATH (utative)
L	3.30.1330.20	Alpha Beta	2-Layer Sandwich	60s Ribosomal Protein L30	Chain: A	CATH (utative)
L	1.10.287.600	Mainly Alpha	Orthogonal Bundle	Helix Hairpins	Helix hairpin bin	CATH (utative)
J	3.40.50.1440	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Tubulin/FtsZ, GTPase domain	CATH (utative)
J	3.30.1330.20	Alpha Beta	2-Layer Sandwich	60s Ribosomal Protein L30	Chain: A	CATH (utative)
J	1.10.287.600	Mainly Alpha	Orthogonal Bundle	Helix Hairpins	Helix hairpin bin	CATH (utative)
H	3.40.50.1440	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Tubulin/FtsZ, GTPase domain	CATH (utative)
H	3.30.1330.20	Alpha Beta	2-Layer Sandwich	60s Ribosomal Protein L30	Chain: A	CATH (utative)
H	1.10.287.600	Mainly Alpha	Orthogonal Bundle	Helix Hairpins	Helix hairpin bin	CATH (utative)
F	3.40.50.1440	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Tubulin/FtsZ, GTPase domain	CATH (utative)
F	3.30.1330.20	Alpha Beta	2-Layer Sandwich	60s Ribosomal Protein L30	Chain: A	CATH (utative)
F	1.10.287.600	Mainly Alpha	Orthogonal Bundle	Helix Hairpins	Helix hairpin bin	CATH (utative)
D	3.40.50.1440	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Tubulin/FtsZ, GTPase domain	CATH (utative)
D	3.30.1330.20	Alpha Beta	2-Layer Sandwich	60s Ribosomal Protein L30	Chain: A	CATH (utative)
D	1.10.287.600	Mainly Alpha	Orthogonal Bundle	Helix Hairpins	Helix hairpin bin	CATH (utative)
B	3.40.50.1440	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Tubulin/FtsZ, GTPase domain	CATH (utative)
B	3.30.1330.20	Alpha Beta	2-Layer Sandwich	60s Ribosomal Protein L30	Chain: A	CATH (utative)
B	1.10.287.600	Mainly Alpha	Orthogonal Bundle	Helix Hairpins	Helix hairpin bin	CATH (utative)
O	3.40.50.1440	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Tubulin/FtsZ, GTPase domain	CATH (utative)
O	3.30.1330.20	Alpha Beta	2-Layer Sandwich	60s Ribosomal Protein L30	Chain: A	CATH (utative)
M	3.40.50.1440	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Tubulin/FtsZ, GTPase domain	CATH (utative)
M	3.30.1330.20	Alpha Beta	2-Layer Sandwich	60s Ribosomal Protein L30	Chain: A	CATH (utative)
K	3.40.50.1440	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Tubulin/FtsZ, GTPase domain	CATH (utative)
K	3.30.1330.20	Alpha Beta	2-Layer Sandwich	60s Ribosomal Protein L30	Chain: A	CATH (utative)
I	3.40.50.1440	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Tubulin/FtsZ, GTPase domain	CATH (utative)
I	3.30.1330.20	Alpha Beta	2-Layer Sandwich	60s Ribosomal Protein L30	Chain: A	CATH (utative)
G	3.40.50.1440	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Tubulin/FtsZ, GTPase domain	CATH (utative)
G	3.30.1330.20	Alpha Beta	2-Layer Sandwich	60s Ribosomal Protein L30	Chain: A	CATH (utative)
E	3.40.50.1440	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Tubulin/FtsZ, GTPase domain	CATH (utative)
E	3.30.1330.20	Alpha Beta	2-Layer Sandwich	60s Ribosomal Protein L30	Chain: A	CATH (utative)
C	3.40.50.1440	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Tubulin/FtsZ, GTPase domain	CATH (utative)
C	3.30.1330.20	Alpha Beta	2-Layer Sandwich	60s Ribosomal Protein L30	Chain: A	CATH (utative)
A	3.40.50.1440	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Tubulin/FtsZ, GTPase domain	CATH (utative)
A	3.30.1330.20	Alpha Beta	2-Layer Sandwich	60s Ribosomal Protein L30	Chain: A	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
B, D, F, H, J B, D, F, H, J, L, N, P	PF00091	Tubulin/FtsZ family, GTPase domain (Tubulin)	Tubulin/FtsZ family, GTPase domain	This family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ...	This family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tubulin is the major component of microtubules.	Domain
B, D, F, H, J B, D, F, H, J, L, N, P	PF03953	Tubulin C-terminal domain (Tubulin_C)	Tubulin C-terminal domain	This family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tub ...	This family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tubulin is the major component of microtubules. (The FtsZ GTPases have been split into their won family).	Domain
A, C, E, G, I A, C, E, G, I, K, M, O	PF00091	Tubulin/FtsZ family, GTPase domain (Tubulin)	Tubulin/FtsZ family, GTPase domain	This family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ...	This family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tubulin is the major component of microtubules.	Domain
A, C, E, G, I A, C, E, G, I, K, M, O	PF03953	Tubulin C-terminal domain (Tubulin_C)	Tubulin C-terminal domain	This family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tub ...	This family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tubulin is the major component of microtubules. (The FtsZ GTPases have been split into their won family).	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B, D, F, H, J B, D, F, H, J, L, N, P	Tubulin beta-3 chain	binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding protein binding signaling receptor binding netrin receptor binding structural constituent of cytoskeleton structural molecule activity peptide binding cation binding metal ion binding pyrophosphatase activity GTPase activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity	cellular process cell cycle mitotic cell cycle developmental process multicellular organism development multicellular organismal process dorsal root ganglion development anatomical structure development nervous system development tissue development ganglion development system development axonogenesis cellular developmental process cellular process cell cycle mitotic cell cycle developmental process multicellular organism development multicellular organismal process dorsal root ganglion development anatomical structure development nervous system development tissue development ganglion development system development axonogenesis cellular developmental process cell projection organization plasma membrane bounded cell projection morphogenesis cell development neuron projection development cell morphogenesis cellular component organization neurogenesis cell projection morphogenesis neuron differentiation neuron projection morphogenesis cell differentiation cellular component organization or biogenesis plasma membrane bounded cell projection organization axon guidance axon development cell morphogenesis involved in neuron differentiation generation of neurons anatomical structure morphogenesis neuron projection guidance neuron development organelle organization microtubule cytoskeleton organization microtubule-based process cytoskeleton organization	cell projection cellular anatomical structure cell leading edge plasma membrane bounded cell projection lamellipodium extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region organelle vesicle extracellular membrane-bounded organelle cell periphery cell projection cellular anatomical structure cell leading edge plasma membrane bounded cell projection lamellipodium extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region organelle vesicle extracellular membrane-bounded organelle cell periphery somatodendritic compartment dendrite dendritic tree neuron projection intracellular anatomical structure cytoplasm intracellular organelle mitotic spindle cytoskeleton spindle membraneless organelle intracellular membraneless organelle microtubule cytoskeleton growth cone axon distal axon site of polarized growth intercellular bridge cell body neuronal cell body actin-based cell projection filopodium polymeric cytoskeletal fiber supramolecular fiber microtubule supramolecular polymer supramolecular complex nucleus intracellular membrane-bounded organelle
A, C, E, G, I A, C, E, G, I, K, M, O	Tubulin alpha-1B chain	RNA binding double-stranded RNA binding binding nucleic acid binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding RNA binding double-stranded RNA binding binding nucleic acid binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding structural constituent of cytoskeleton structural molecule activity ubiquitin protein ligase binding protein binding ubiquitin-like protein ligase binding enzyme binding pyrophosphatase activity GTPase activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity	cellular process cell cycle mitotic cell cycle cell division response to interleukin-4 response to peptide response to stimulus response to chemical response to cytokine cellular response to cytokine stimulus cellular response to interleukin-4 localization cellular localization transport cellular process cell cycle mitotic cell cycle cell division response to interleukin-4 response to peptide response to stimulus response to chemical response to cytokine cellular response to cytokine stimulus cellular response to interleukin-4 localization cellular localization transport establishment of localization in cell cytoskeleton-dependent intracellular transport intracellular transport establishment of localization cellular component organization organelle organization microtubule cytoskeleton organization microtubule-based process cellular component organization or biogenesis cytoskeleton organization	membrane-bounded organelle cell projection cellular anatomical structure organelle cilium plasma membrane bounded cell projection intracellular anatomical structure cytoplasm intracellular organelle cytoskeleton membraneless organelle intracellular membraneless organelle microtubule cytoskeleton polymeric cytoskeletal fiber membrane-bounded organelle cell projection cellular anatomical structure organelle cilium plasma membrane bounded cell projection intracellular anatomical structure cytoplasm intracellular organelle cytoskeleton membraneless organelle intracellular membraneless organelle microtubule cytoskeleton polymeric cytoskeletal fiber cytoplasmic microtubule supramolecular fiber microtubule supramolecular polymer supramolecular complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B, D, F, H, J B, D, F, H, J, L, N, P	IPR008280	Tubulin/FtsZ, C-terminal	Homologous Superfamily
B, D, F, H, J B, D, F, H, J, L, N, P	IPR017975	Tubulin, conserved site	Conserved Site
B, D, F, H, J B, D, F, H, J, L, N, P	IPR023123	Tubulin, C-terminal	Homologous Superfamily
B, D, F, H, J B, D, F, H, J, L, N, P	IPR002453	Beta tubulin	Family
B, D, F, H, J B, D, F, H, J, L, N, P	IPR013838	Beta tubulin, autoregulation binding site	Binding Site
B, D, F, H, J B, D, F, H, J, L, N, P	IPR018316	Tubulin/FtsZ, 2-layer sandwich domain	Domain
B, D, F, H, J B, D, F, H, J, L, N, P	IPR003008	Tubulin/FtsZ, GTPase domain	Domain
B, D, F, H, J B, D, F, H, J, L, N, P	IPR037103	Tubulin/FtsZ-like, C-terminal domain	Homologous Superfamily
B, D, F, H, J B, D, F, H, J, L, N, P	IPR000217	Tubulin	Family
B, D, F, H, J B, D, F, H, J, L, N, P	IPR036525	Tubulin/FtsZ, GTPase domain superfamily	Homologous Superfamily
A, C, E, G, I A, C, E, G, I, K, M, O	IPR008280	Tubulin/FtsZ, C-terminal	Homologous Superfamily
A, C, E, G, I A, C, E, G, I, K, M, O	IPR017975	Tubulin, conserved site	Conserved Site
A, C, E, G, I A, C, E, G, I, K, M, O	IPR023123	Tubulin, C-terminal	Homologous Superfamily
A, C, E, G, I A, C, E, G, I, K, M, O	IPR018316	Tubulin/FtsZ, 2-layer sandwich domain	Domain
A, C, E, G, I A, C, E, G, I, K, M, O	IPR003008	Tubulin/FtsZ, GTPase domain	Domain
A, C, E, G, I A, C, E, G, I, K, M, O	IPR037103	Tubulin/FtsZ-like, C-terminal domain	Homologous Superfamily
A, C, E, G, I A, C, E, G, I, K, M, O	IPR002452	Alpha tubulin	Family
A, C, E, G, I A, C, E, G, I, K, M, O	IPR000217	Tubulin	Family
A, C, E, G, I A, C, E, G, I, K, M, O	IPR036525	Tubulin/FtsZ, GTPase domain superfamily	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
B, D, F, H, J B, D, F, H, J, L, N, P	: Q13509	fibrosis of extraocular muscles, congenital, 3A, with or without extraocular involvement breast carcinoma complex cortical dysplasia with other brain malformations 1 ovarian cancer neuroblastoma gastric cancer psoriasis Hodgkin's granuloma skin basal cell carcinoma intellectual disability transitional cell carcinoma Langerhans cell histiocytosis X-linked mixed deafness with perilymphatic gusher acute lymphoblastic leukemia melanoma fibrosis of extraocular muscles, congenital, 3A, with or without extraocular involvement breast carcinoma complex cortical dysplasia with other brain malformations 1 ovarian cancer neuroblastoma gastric cancer psoriasis Hodgkin's granuloma skin basal cell carcinoma intellectual disability transitional cell carcinoma Langerhans cell histiocytosis X-linked mixed deafness with perilymphatic gusher acute lymphoblastic leukemia melanoma Charcot-Marie-Tooth disease open-angle glaucoma photosensitivity disease gestational trophoblastic neoplasm rhabdomyosarcoma Hodgkins lymphoma squamous cell carcinoma Kaposi's sarcoma liposarcoma Burkitt lymphoma mycosis fungoides non-small cell lung carcinoma cutaneous melanoma prostate cancer hypertensive disorder testicular cancer kidney Wilms tumor vitiligo breast cancer cerebrovascular disorder congenital fibrosis of extraocular muscles ocular hypertension ovarian neoplasm fallopian tube carcinoma
A, C, E, G, I A, C, E, G, I, K, M, O	: P68363	osteoporosis anogenital human papillomavirus infection breast cancer Osteoporosis, Senile attention deficit hyperactivity disorder, inattentive type bipolar disorder