Annotations: 7LC0

Structure of D-Glucosaminate-6-phosphate Ammonia-lyase

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Protein Modification Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Acetyltransf_1	e7lc0A1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: Acetyltransf_1	ECOD (v294.2)
B	14-3-3	e7lc0B1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
C	14-3-3	e7lc0C1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
D	14-3-3	e7lc0D1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
F	14-3-3	e7lc0F1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
G	14-3-3	e7lc0G1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
H	14-3-3	e7lc0H1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)
E	14-3-3	e7lc0E1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: 14-3-3	ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H	PF03841	L-seryl-tRNA selenium transferase (SelA)	L-seryl-tRNA selenium transferase		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H	Putative selenocysteine synthase (L-seryl-tRNA(Ser) selenium transferase)	catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid selenotransferase activity catalytic activity, acting on a tRNA transferase activity L-seryl-tRNA(Sec) selenium transferase activity catalytic activity cation binding ion binding binding metal ion binding small molecule binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H	IPR015424	Pyridoxal phosphate-dependent transferase	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR006337	D-glucosaminate-6-phosphate ammonia lyase DgaE-like	Family
A, B, C, D, E A, B, C, D, E, F, G, H	IPR018319	L-seryl-tRNA selenium transferase-like	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR015421	Pyridoxal phosphate-dependent transferase, major domain	Homologous Superfamily

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
A, B, C, D, E A, B, C, D, E, F, G, H	LLP	Parent Component: LYS : AA0119 : N6-pyridoxal phosphate-L-lysine MOD:00128
A, B, C, D, E A, B, C, D, E, F, G, H	MSE	Parent Component: MET : AA0119

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.