Annotations: 7L7R

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	C1-set_4	e7l7rA2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: C1-set_4	ECOD (1.6)
A	V-set	e7l7rA1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set	ECOD (1.6)
B	V-set_8	e7l7rB1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set_8	ECOD (1.6)
B	C1-set_1	e7l7rB2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: C1-set_1	ECOD (1.6)
C	C1-set_4	e7l7rC2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: C1-set_4	ECOD (1.6)
C	V-set	e7l7rC1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set	ECOD (1.6)
D	V-set_8	e7l7rD1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set_8	ECOD (1.6)
D	C1-set_1	e7l7rD2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: C1-set_1	ECOD (1.6)

SAbDab Antibody Annotation SAbDab Database Homepage

Chain	Chain Class	Chain Subclass	Chain Type	Antigen Name(s)	Provenance Source
A	Light Chain	IGKV1	Kappa	glycoprotein c	SAbDab (2024-09-13)
B	Heavy Chain	IGHV3	-	glycoprotein c	SAbDab (2024-09-13)
C	Light Chain	IGKV1	Kappa	glycoprotein c	SAbDab (2024-09-13)
D	Heavy Chain	IGHV4	-	glycoprotein c	SAbDab (2024-09-13)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
E [auth G]	PF20682	Hantavirus glycoprotein Gc, C-terminal (Hanta_Gc_C)	Hantavirus glycoprotein Gc, C-terminal	The medium (M) genome segment of hantaviruses (family Bunyaviridae) encodes the two virion glycoproteins [1,2] Gn and Gc (also known as G1 and G2, respectively) as a polyprotein precursor. Gn and Gc forms homotetramers at the surface of the virion, w ...	The medium (M) genome segment of hantaviruses (family Bunyaviridae) encodes the two virion glycoproteins [1,2] Gn and Gc (also known as G1 and G2, respectively) as a polyprotein precursor. Gn and Gc forms homotetramers at the surface of the virion, which attach the virion to host cell receptors including integrin beta3/ITGB3 and induce internalisation, predominantly through clathrin-dependent endocytosis [3,4]. This protein has a typical class II fusion protein fold consisting of a central beta-sandwich domain (termed domain I) made of eight beta-strands arranged in two antiparallel beta-sheets; domain II which has an elongated shape with two subdomains (a central, opened beta-barrel proximal to domain I and a distal beta-sandwich 'tip') and the C-terminal domain III, represented in this entry, which has a Ig-like fold [1,2].	Domain
E [auth G]	PF01561	Hantavirus glycoprotein Gc, N-terminal (Hanta_Gc_N)	Hantavirus glycoprotein Gc, N-terminal	The medium (M) genome segment of hantaviruses (family Bunyaviridae) encodes the two virion glycoproteins Gn and Gc (also known as G1 and G2, respectively) as a polyprotein precursor [1-4]. Gn and Gc forms homotetramers at the surface of the virion, w ...	The medium (M) genome segment of hantaviruses (family Bunyaviridae) encodes the two virion glycoproteins Gn and Gc (also known as G1 and G2, respectively) as a polyprotein precursor [1-4]. Gn and Gc forms homotetramers at the surface of the virion, which attach the virion to host cell receptors including integrin beta3/ITGB3 and induce internalisation, predominantly through clathrin-dependent endocytosis [2]. Gc protein has a typical class II fusion protein fold consisting of a central beta-sandwich domain (termed domain I) made of eight beta-strands arranged in two antiparallel beta-sheets, domain II which has an elongated shape with two subdomains (central, opened beta-barrel proximal to domain I and a distal beta-sandwich 'tip') and and domain III, which has an Ig-like fold [3,4]. This entry represents the N-terminal region of Gc containing the central and dimerisation domains (which includes domain I and II). This region has a conserved CNP motif, suggested to be an integrin-binding motif [2].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	ADI-36121 Fab light chain	-	-	-
B	ADI-36121 Fab heavy chain	-	-	-
C	ADI-37801 Fab light chain	-	-	-
D	ADI-37801 Fab heavy chain	-	-	-
E [auth G]	Glycoprotein C	-	viral process fusion of virus membrane with host endosome membrane membrane fusion involved in viral entry into host cell virion attachment to host cell biological process involved in interspecies interaction between organisms adhesion of symbiont to host cell viral life cycle adhesion of symbiont to host biological process involved in interaction with host biological process involved in symbiotic interaction symbiont-mediated perturbation of host defense response response to host defenses response to stimulus response to other organism viral process fusion of virus membrane with host endosome membrane membrane fusion involved in viral entry into host cell virion attachment to host cell biological process involved in interspecies interaction between organisms adhesion of symbiont to host cell viral life cycle adhesion of symbiont to host biological process involved in interaction with host biological process involved in symbiotic interaction symbiont-mediated perturbation of host defense response response to host defenses response to stimulus response to other organism response to defenses of other organism modulation by virus of host process response to external stimulus virus-mediated perturbation of host defense response response to biotic stimulus symbiont-mediated perturbation of host process response to host response to external biotic stimulus modulation of process of another organism modulation by virus of host cellular process import into cell receptor-mediated endocytosis of virus by host cell transport establishment of localization vesicle-mediated transport localization symbiont entry into host cell clathrin-dependent endocytosis symbiont entry into host cellular process clathrin-dependent endocytosis of virus by host cell receptor-mediated endocytosis endocytosis endocytosis involved in viral entry into host cell transport of virus	membrane cellular anatomical entity virion component virion membrane host intracellular membrane-bounded organelle host cellular component host intracellular part host cell endoplasmic reticulum host cell membrane host cell cytoplasm part host intracellular organelle host cell cytoplasm host cell part host cell endomembrane system membrane cellular anatomical entity virion component virion membrane host intracellular membrane-bounded organelle host cellular component host intracellular part host cell endoplasmic reticulum host cell membrane host cell cytoplasm part host intracellular organelle host cell cytoplasm host cell part host cell endomembrane system host intracellular region host cell endoplasmic reticulum membrane viral membrane viral envelope host cell Golgi membrane host cell Golgi apparatus

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
E [auth G]	IPR048791	Glycoprotein Gc, C-terminal, bunyavirales	Domain
E [auth G]	IPR002532	Hantavirus glycoprotein Gc, N-terminal domain	Domain
E [auth G]	IPR048801	Structural glycoprotein Gn, nairovirus	Domain
E [auth G]	IPR048529	GP38, nairovirus	Domain
E [auth G]	IPR049491	Mucin-like domain, nairovirus	Domain
E [auth G]	IPR048796	Non-Structural protein M domain, nairovirus	Domain
E [auth G]	IPR012487	Nairovirus M polyprotein-like	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.