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 7HZV | pdb_00007hzv

PanDDA analysis group deposition -- Crystal structure of Enterococcus faecium VatD in complex with ZINC000000438614

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
CSCOP2B SuperfamilyTrimeric LpxA-like enzymes 8036503 3001804 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyTrimeric LpxA-like enzymes 8036503 3001804 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyTrimeric LpxA-like enzymes 8036503 3001804 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
CSod_Fe_Ce7hzvC1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Sod_Fe_CECOD (v295.2)

AMR Gene: CARD Annotation CARD Database Homepage

ChainsAccessionShort NameDescriptionProvenance Source (Version)
A, B, C
ARO:3002843vatDvatD is a transposon-mediated acetyltransferase found in Enterococcus faecium.CARD (4.0.2)

AMR Gene Family: CARD Annotation CARD Database Homepage

ChainsAccessionGene FamilyDrug Class Resistance MachanismProvenance Source (Version)
A, B, C
ARO:3000453streptogramin vat acetyltransferasestreptogramin antibioticantibiotic inactivationCARD (4.0.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C
Streptogramin A acetyltransferase - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C
IPR011004Trimeric LpxA-like superfamilyHomologous Superfamily
A, B, C
IPR018357Hexapeptide transferase, conserved siteConserved Site
A, B, C
IPR050179Transferase hexapeptide repeatFamily
A, B, C
IPR001451Hexapeptide repeatRepeat