Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth O]SCOP2B SuperfamilyVacuolar ATP synthase subunit C 8042806 3001744 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth O]V-ATPase_C_1ste7fdeO1 A: alpha bundlesX: helical bundle domain in vacuolar ATP synthase subunit C (From Topology)H: helical bundle domain in vacuolar ATP synthase subunit C (From Topology)T: helical bundle domain in vacuolar ATP synthase subunit CF: V-ATPase_C_1stECOD (1.6)
A [auth O]V-ATPase_C_3rde7fdeO3 A: a+b two layersX: Alpha-beta plaitsH: ferredoxin-like domain in vacuolar ATP synthase subunit C (From Topology)T: ferredoxin-like domain in vacuolar ATP synthase subunit CF: V-ATPase_C_3rdECOD (1.6)
A [auth O]V-ATPase_C_2nde7fdeO2 A: a+b two layersX: Alpha-beta plaitsH: ferredoxin-like domain in vacuolar ATP synthase subunit C (From Topology)T: ferredoxin-like domain in vacuolar ATP synthase subunit CF: V-ATPase_C_2ndECOD (1.6)
B [auth G]vATP-synt_E_Ce7fdeG1 A: a+b two layersX: FwdE/GAPDH domain-likeH: V-type ATPase subunit E (From Topology)T: V-type ATPase subunit EF: vATP-synt_E_CECOD (1.6)
B [auth G]vATP-synt_E_Ne7fdeG2 A: extended segmentsX: Helical region in V-type proton ATPase subunit E (From Topology)H: Helical region in V-type proton ATPase subunit E (From Topology)T: Helical region in V-type proton ATPase subunit EF: vATP-synt_E_NECOD (1.6)
J [auth K]vATP-synt_E_Ce7fdeK2 A: a+b two layersX: FwdE/GAPDH domain-likeH: V-type ATPase subunit E (From Topology)T: V-type ATPase subunit EF: vATP-synt_E_CECOD (1.6)
J [auth K]vATP-synt_E_Ne7fdeK1 A: extended segmentsX: Helical region in V-type proton ATPase subunit E (From Topology)H: Helical region in V-type proton ATPase subunit E (From Topology)T: Helical region in V-type proton ATPase subunit EF: vATP-synt_E_NECOD (1.6)
N [auth I]vATP-synt_E_Ce7fdeI1 A: a+b two layersX: FwdE/GAPDH domain-likeH: V-type ATPase subunit E (From Topology)T: V-type ATPase subunit EF: vATP-synt_E_CECOD (1.6)
N [auth I]vATP-synt_E_Ne7fdeI2 A: extended segmentsX: Helical region in V-type proton ATPase subunit E (From Topology)H: Helical region in V-type proton ATPase subunit E (From Topology)T: Helical region in V-type proton ATPase subunit EF: vATP-synt_E_NECOD (1.6)
C [auth H]V-ATPase_Ge7fdeH1 A: extended segmentsX: V-type proton ATPase subunit G (From Topology)H: V-type proton ATPase subunit G (From Topology)T: V-type proton ATPase subunit GF: V-ATPase_GECOD (1.6)
K [auth L]V-ATPase_Ge7fdeL1 A: extended segmentsX: V-type proton ATPase subunit G (From Topology)H: V-type proton ATPase subunit G (From Topology)T: V-type proton ATPase subunit GF: V-ATPase_GECOD (1.6)
O [auth J]V-ATPase_Ge7fdeJ1 A: extended segmentsX: V-type proton ATPase subunit G (From Topology)H: V-type proton ATPase subunit G (From Topology)T: V-type proton ATPase subunit GF: V-ATPase_GECOD (1.6)
D [auth A]ATP-synt_ab_Ne7fdeA3 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: ATP-synt_ab_NECOD (1.6)
D [auth A]ATP-synt_ab_Ce7fdeA1 A: alpha superhelicesX: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)T: C-terminal domain of alpha and beta subunits of F1 ATP synthaseF: ATP-synt_ab_CECOD (1.6)
D [auth A]ATP-synt_ab_Xtne7fdeA4 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Single hybrid motifF: ATP-synt_ab_XtnECOD (1.6)
D [auth A]ATP-synt_abe7fdeA2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: ATP-synt_abECOD (1.6)
F [auth C]ATP-synt_ab_Ne7fdeC1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: ATP-synt_ab_NECOD (1.6)
F [auth C]ATP-synt_ab_Ce7fdeC2 A: alpha superhelicesX: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)T: C-terminal domain of alpha and beta subunits of F1 ATP synthaseF: ATP-synt_ab_CECOD (1.6)
F [auth C]ATP-synt_ab_Xtne7fdeC3 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Single hybrid motifF: ATP-synt_ab_XtnECOD (1.6)
F [auth C]ATP-synt_abe7fdeC4 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: ATP-synt_abECOD (1.6)
H [auth E]ATP-synt_ab_Ne7fdeE2 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: ATP-synt_ab_NECOD (1.6)
H [auth E]ATP-synt_ab_Ce7fdeE4 A: alpha superhelicesX: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)T: C-terminal domain of alpha and beta subunits of F1 ATP synthaseF: ATP-synt_ab_CECOD (1.6)
H [auth E]ATP-synt_ab_Xtne7fdeE1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Single hybrid motifF: ATP-synt_ab_XtnECOD (1.6)
H [auth E]ATP-synt_abe7fdeE3 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: ATP-synt_abECOD (1.6)
E [auth B]ATP-synt_ab_Ne7fdeB3 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: ATP-synt_ab_NECOD (1.6)
E [auth B]ATP-synt_ab_Ce7fdeB2 A: alpha superhelicesX: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)T: C-terminal domain of alpha and beta subunits of F1 ATP synthaseF: ATP-synt_ab_CECOD (1.6)
E [auth B]ATP-synt_abe7fdeB1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: ATP-synt_abECOD (1.6)
G [auth D]ATP-synt_ab_Ne7fdeD3 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: ATP-synt_ab_NECOD (1.6)
G [auth D]ATP-synt_ab_Ce7fdeD2 A: alpha superhelicesX: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)T: C-terminal domain of alpha and beta subunits of F1 ATP synthaseF: ATP-synt_ab_CECOD (1.6)
G [auth D]ATP-synt_abe7fdeD1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: ATP-synt_abECOD (1.6)
I [auth F]ATP-synt_ab_Ne7fdeF3 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: ATP-synt_ab_NECOD (1.6)
I [auth F]ATP-synt_ab_Ce7fdeF2 A: alpha superhelicesX: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)T: C-terminal domain of alpha and beta subunits of F1 ATP synthaseF: ATP-synt_ab_CECOD (1.6)
I [auth F]ATP-synt_abe7fdeF1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: ATP-synt_abECOD (1.6)
L [auth M]ATP-synt_De7fdeM1 A: alpha bundlesX: V-type proton ATPase subunit D (From Topology)H: V-type proton ATPase subunit D (From Topology)T: V-type proton ATPase subunit DF: ATP-synt_DECOD (1.6)
M [auth N]ATP-synt_Fe7fdeN1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: AtpF-like (From Topology)T: AtpF-likeF: ATP-synt_FECOD (1.6)
PTLDe7fdeP1 A: beta barrelsX: Lipocalins/StreptavidinH: TLDC domain of oxidation resistance protein 2 (From Topology)T: TLDC domain of oxidation resistance protein 2F: TLDECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth O]PF03223V-ATPase subunit C (V-ATPase_C)V-ATPase subunit C- Family
B [auth G],
J [auth K],
N [auth I]
PF01991ATP synthase (E/31 kDa) subunit (vATP-synt_E)ATP synthase (E/31 kDa) subunit- Family
C [auth H],
K [auth L],
O [auth J]
PF03179Vacuolar (H+)-ATPase G subunit (V-ATPase_G)Vacuolar (H+)-ATPase G subunit- Coiled-coil
D [auth A],
F [auth C],
H [auth E]
PF00006ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab)ATP synthase alpha/beta family, nucleotide-binding domainThis entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho.Domain
D [auth A],
F [auth C],
H [auth E]
PF22919C-terminal domain of V and A type ATP synthase (ATP-synt_VA_C)C-terminal domain of V and A type ATP synthaseThis entry represents a small alpha helical domain found at the C-terminus of a variety of ATP synthases.Domain
D [auth A],
F [auth C],
H [auth E]
PF16886ATPsynthase alpha/beta subunit N-term extension (ATP-synt_ab_Xtn)ATPsynthase alpha/beta subunit N-term extension- Family
D [auth A],
F [auth C],
H [auth E]
PF02874ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N)ATP synthase alpha/beta family, beta-barrel domainThis family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella.Domain
E [auth B],
G [auth D],
I [auth F]
PF00006ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab)ATP synthase alpha/beta family, nucleotide-binding domainThis entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho.Domain
E [auth B],
G [auth D],
I [auth F]
PF22919C-terminal domain of V and A type ATP synthase (ATP-synt_VA_C)C-terminal domain of V and A type ATP synthaseThis entry represents a small alpha helical domain found at the C-terminus of a variety of ATP synthases.Domain
E [auth B],
G [auth D],
I [auth F]
PF02874ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N)ATP synthase alpha/beta family, beta-barrel domainThis family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella.Domain
L [auth M]PF01813ATP synthase subunit D (ATP-synt_D)ATP synthase subunit D- Family
M [auth N]PF01990ATP synthase (F/14-kDa) subunit (ATP-synt_F)ATP synthase (F/14-kDa) subunit- Family
PF07534TLD (TLD)TLDThis domain is predicted to be an enzyme [1] and is often found associated with Pfam:PF01476. It's structure consists of a beta-sandwich surrounded by two helices and two one-turn helices [2].Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth O]V-type proton ATPase subunit C
B [auth G],
J [auth K],
N [auth I]
V-type proton ATPase subunit E
C [auth H],
K [auth L],
O [auth J]
V-type proton ATPase subunit G
D [auth A],
F [auth C],
H [auth E]
Yeast Vacuolar ATPase A subunit
E [auth B],
G [auth D],
I [auth F]
V-type proton ATPase subunit B
L [auth M]V-type proton ATPase subunit D
M [auth N]V-type proton ATPase subunit F
Oxidation resistance protein 1-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth O]IPR036132Vacuolar ATP synthase subunit C superfamilyHomologous Superfamily
A [auth O]IPR004907ATPase, V1 complex, subunit CFamily
B [auth G],
J [auth K],
N [auth I]
IPR038495V-type ATPase subunit E, C-terminal domain superfamilyHomologous Superfamily
B [auth G],
J [auth K],
N [auth I]
IPR002842V-type ATPase subunit EFamily
C [auth H],
K [auth L],
O [auth J]
IPR005124Vacuolar (H+)-ATPase G subunitFamily
D [auth A],
F [auth C],
H [auth E]
IPR036844Hint domain superfamilyHomologous Superfamily
D [auth A],
F [auth C],
H [auth E]
IPR022878V-type ATP synthase catalytic alpha chainFamily
D [auth A],
F [auth C],
H [auth E]
IPR006142InteinDomain
D [auth A],
F [auth C],
H [auth E]
IPR007868Hom-end-associated HintDomain
D [auth A],
F [auth C],
H [auth E]
IPR004042Intein DOD homing endonuclease, central regionDomain
D [auth A],
F [auth C],
H [auth E]
IPR024034ATPase, F1/V1 complex, beta/alpha subunit, C-terminalHomologous Superfamily
D [auth A],
F [auth C],
H [auth E]
IPR036121ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamilyHomologous Superfamily
D [auth A],
F [auth C],
H [auth E]
IPR006141Intein N-terminal splicing regionPTM
D [auth A],
F [auth C],
H [auth E]
IPR000194ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domainDomain
D [auth A],
F [auth C],
H [auth E]
IPR003586Hint domain C-terminalDomain
D [auth A],
F [auth C],
H [auth E]
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
D [auth A],
F [auth C],
H [auth E]
IPR004100ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domainDomain
D [auth A],
F [auth C],
H [auth E]
IPR031686ATPsynthase alpha/beta subunit, N-terminal extensionDomain
D [auth A],
F [auth C],
H [auth E]
IPR030934Intein C-terminal splicing regionConserved Site
D [auth A],
F [auth C],
H [auth E]
IPR027434Homing endonucleaseHomologous Superfamily
D [auth A],
F [auth C],
H [auth E]
IPR023366ATP synthase subunit alpha, N-terminal domain-like superfamilyHomologous Superfamily
D [auth A],
F [auth C],
H [auth E]
IPR020003ATPase, alpha/beta subunit, nucleotide-binding domain, active siteActive Site
D [auth A],
F [auth C],
H [auth E]
IPR003587Hint domain N-terminalDomain
D [auth A],
F [auth C],
H [auth E]
IPR007869Homing endonuclease PI-SceDomain
E [auth B],
G [auth D],
I [auth F]
IPR000194ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domainDomain
E [auth B],
G [auth D],
I [auth F]
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
E [auth B],
G [auth D],
I [auth F]
IPR004100ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domainDomain
E [auth B],
G [auth D],
I [auth F]
IPR005723ATPase, V1 complex, subunit BFamily
E [auth B],
G [auth D],
I [auth F]
IPR022879V-type ATP synthase regulatory subunit B/betaFamily
E [auth B],
G [auth D],
I [auth F]
IPR020003ATPase, alpha/beta subunit, nucleotide-binding domain, active siteActive Site
L [auth M]IPR002699ATPase, V1 complex, subunit DFamily
M [auth N]IPR036906ATPase, V1 complex, subunit F superfamilyHomologous Superfamily
M [auth N]IPR005772ATPase, V1 complex, subunit F, eukaryoticFamily
M [auth N]IPR008218ATPase, V1 complex, subunit FFamily
IPR006571TLDc domainDomain