7EZZ
Crystal structure of Salmonella typhi outer membrane phospholipase (OMPLA) dimer with bound calcium
External Resource: Annotation
- Domain Annotation: SCOP/SCOPe Classification
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Membrane Protein Annotation: OPM
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: MemProtMD
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | d7ezzb_ | Membrane and cell surface proteins and peptides | Transmembrane beta-barrels | Outer membrane phospholipase A (OMPLA) | Outer membrane phospholipase A (OMPLA) | automated matches | (Salmonella enterica subsp. enterica serovar Typhi ) [TaxId: 90370 ], | SCOPe (2.08) |
A | d7ezza_ | Membrane and cell surface proteins and peptides | Transmembrane beta-barrels | Outer membrane phospholipase A (OMPLA) | Outer membrane phospholipase A (OMPLA) | automated matches | (Salmonella enterica subsp. enterica serovar Typhi ) [TaxId: 90370 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2B Superfamily | Outer membrane phospholipase A (OMPLA) | 8075238 | 3000218 | SCOP2B (2022-06-29) |
A | SCOP2 Family | Outer membrane phospholipase A (OMPLA) | 8075237 | 4003058 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Outer membrane phospholipase A (OMPLA) | 8075238 | 3000218 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | PLA1 | e7ezzB1 | A: beta barrels | X: Outer membrane meander beta-barrels | H: Outer membrane phospholipase A (OMPLA) (From Topology) | T: Outer membrane phospholipase A (OMPLA) | F: PLA1 | ECOD (1.6) |
A | PLA1 | e7ezzA1 | A: beta barrels | X: Outer membrane meander beta-barrels | H: Outer membrane phospholipase A (OMPLA) (From Topology) | T: Outer membrane phospholipase A (OMPLA) | F: PLA1 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02253 | Phospholipase A1 (PLA1) | Phospholipase A1 | Phospholipase A1 is a bacterial outer membrane bound acyl hydrolase with a broad substrate specificity EC:3.1.1.32. It has been proposed that Ser164 is the active site for Swiss:P00631 [1]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR003187 | Phospholipase A1 | Family | |
IPR036541 | Phospholipase A1 superfamily | Homologous Superfamily |
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Beta-barrel transmembrane | OM phospholipase (n=12,S=16) | OM phospholipase A, OmpLA |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Chains | External Link | Comment |
---|---|---|
MemProtMD | Annotated as membrane protein by MemProtMD |