Crystal structure of Truncated (Delta 1-19) Chitoporin VhChiP from Vibrio harveyi in complex with chitohexaose


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APeptidase_S29e7eqrA1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Peptidase_S29ECOD (v295)
BPeptidase_S29e7eqrB1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Peptidase_S29ECOD (v295)
CPeptidase_S29e7eqrC1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Peptidase_S29ECOD (v295)
DPeptidase_S29e7eqrD1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Peptidase_S29ECOD (v295)
EPeptidase_S29e7eqrE1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Peptidase_S29ECOD (v295)
FPeptidase_S29e7eqrF1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Peptidase_S29ECOD (v295)

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR050298Gram-negative bacterial outer membrane porinFamily
A, B, C, D, E
IPR033900Porin domain, Gram-negative typeDomain
A, B, C, D, E
IPR023614Porin domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR001702Porin, Gram-negative typeFamily

Membrane Protein Annotation: OPM OPM Database Homepage

ChainsExternal LinkTypeClassSuperfamilyFamily
A, B, C, D, E
OPMTransmembraneBeta-barrel transmembraneTrimeric porins (n=16,S=20)General Bacterial Porin (GBP)

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

ChainsExternal LinkComment
A, B, C, D, E
PDBTMAnnotated as membrane protein by PDBTM