Structure of Csy-AcrIF24-dsDNA
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| P [auth S] | SCOP2B Superfamily | CRISPR-associated proteins | 8052171 | 3001554 | SCOP2B (2022-06-29) |
| H [auth I] | SCOP2B Superfamily | CRISPR-associated proteins | 8052171 | 3001554 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| X | LysR_substrate | e7elnX1 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: LysR_substrate | ECOD (v295.2) |
| U [auth A] | LysR_substrate | e7elnA1 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: LysR_substrate | ECOD (v295.2) |
| P [auth S] | LysR_substrate | e7elnS1 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: LysR_substrate | ECOD (v295.2) |
| H [auth I] | LysR_substrate | e7elnI1 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: LysR_substrate | ECOD (v295.2) |
| O [auth R] | LysR_substrate | e7elnR1 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: LysR_substrate | ECOD (v295.2) |
| N [auth Q] | LysR_substrate | e7elnQ1 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: LysR_substrate | ECOD (v295.2) |
| M [auth P] | LysR_substrate | e7elnP1 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: LysR_substrate | ECOD (v295.2) |
| L [auth O] | LysR_substrate | e7elnO1 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: LysR_substrate | ECOD (v295.2) |
| K [auth N] | LysR_substrate | e7elnN1 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: LysR_substrate | ECOD (v295.2) |
| J [auth M] | LysR_substrate | e7elnM1 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: LysR_substrate | ECOD (v295.2) |
| G [auth H] | LysR_substrate | e7elnH1 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: LysR_substrate | ECOD (v295.2) |
| F [auth G] | LysR_substrate | e7elnG1 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: LysR_substrate | ECOD (v295.2) |
| E [auth F] | LysR_substrate | e7elnF1 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: LysR_substrate | ECOD (v295.2) |
| D [auth E] | LysR_substrate | e7elnE1 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: LysR_substrate | ECOD (v295.2) |
| C [auth D] | LysR_substrate | e7elnD1 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: LysR_substrate | ECOD (v295.2) |
| B [auth C] | LysR_substrate | e7elnC1 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: LysR_substrate | ECOD (v295.2) |
| I [auth L] | LysR_substrate | e7elnL1 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: LysR_substrate | ECOD (v295.2) |
| A [auth B] | LysR_substrate | e7elnB1 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: LysR_substrate | ECOD (v295.2) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| 54-MER DNA | - | - | - | |
| V [auth K], Y | 54-MER DNA | - | - | - |
| U [auth A], X | Type I-F CRISPR-associated protein Csy1 | - | - | - |
| S [auth J], T | RNA (60-MER) | - | - | - |
| Q [auth U], R [auth V] | AcrIF24 | - | - | - |
| H [auth I], P [auth S] | type I-F CRISPR-associated endoribonuclease Cas6/Csy4 |
| - | |
| CRISPR-associated protein Csy3 | - | - | - | |
| A [auth B], I [auth L] | CRISPR type I-F/YPEST-associated protein Csy2 | - | - | - |