7E1B
Crystal structure of VbrR-DNA complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | CheY-like | 8103050 | 3001156 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | C-terminal effector domain of the bipartite response regulators | 8103032 | 3001179 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | CheY-like | 8103050 | 3001156 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | C-terminal effector domain of the bipartite response regulators | 8103032 | 3001179 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | CheY-like | 8103050 | 3001156 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | C-terminal effector domain of the bipartite response regulators | 8103032 | 3001179 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | CheY-like | 8103050 | 3001156 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | C-terminal effector domain of the bipartite response regulators | 8103032 | 3001179 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | C-terminal effector domain of the bipartite response regulators | 8103032 | 3001179 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | CheY-like | 8103050 | 3001156 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | C-terminal effector domain of the bipartite response regulators | 8103032 | 3001179 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | CheY-like | 8103050 | 3001156 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | C-terminal effector domain of the bipartite response regulators | 8103032 | 3001179 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | CheY-like | 8103050 | 3001156 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | CheY-like | 8103050 | 3001156 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | C-terminal effector domain of the bipartite response regulators | 8103032 | 3001179 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00486 | e7e1bA1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF00486 | ECOD (1.6) |
A | PF00072 | e7e1bA2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: CheY-like | F: PF00072 | ECOD (1.6) |
B | PF00486 | e7e1bB1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF00486 | ECOD (1.6) |
B | PF00072 | e7e1bB2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: CheY-like | F: PF00072 | ECOD (1.6) |
C | PF00486 | e7e1bC1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF00486 | ECOD (1.6) |
C | PF00072 | e7e1bC2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: CheY-like | F: PF00072 | ECOD (1.6) |
D | PF00486 | e7e1bD1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF00486 | ECOD (1.6) |
D | PF00072 | e7e1bD2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: CheY-like | F: PF00072 | ECOD (1.6) |
E | PF00486 | e7e1bE1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF00486 | ECOD (1.6) |
E | PF00072 | e7e1bE2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: CheY-like | F: PF00072 | ECOD (1.6) |
F | PF00486 | e7e1bF2 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF00486 | ECOD (1.6) |
F | PF00072 | e7e1bF1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: CheY-like | F: PF00072 | ECOD (1.6) |
G | PF00486 | e7e1bG1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF00486 | ECOD (1.6) |
G | PF00072 | e7e1bG2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: CheY-like | F: PF00072 | ECOD (1.6) |
H | PF00486 | e7e1bH2 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF00486 | ECOD (1.6) |
H | PF00072 | e7e1bH1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: CheY-like | F: PF00072 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00072 | Response regulator receiver domain (Response_reg) | Response regulator receiver domain | This domain receives the signal from the sensor partner in bacterial two-component systems. It is usually found N-terminal to a DNA binding effector domain. | Domain | |
PF00486 | Transcriptional regulatory protein, C terminal (Trans_reg_C) | Transcriptional regulatory protein, C terminal | - | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR039420 | Transcriptional regulatory protein WalR-like | Family | |
IPR001867 | OmpR/PhoB-type DNA-binding domain | Domain | |
IPR011006 | CheY-like superfamily | Homologous Superfamily | |
IPR001789 | Signal transduction response regulator, receiver domain | Domain | |
IPR016032 | Signal transduction response regulator, C-terminal effector | Homologous Superfamily | |
IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily |