7DNM
Crystal structure of the AgCarB2-C2 complex
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | AP_endonuc_2 | e7dnmA1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: AP_endonuc_2 | ECOD (1.6) |
C [auth P] | AP_endonuc_2 | e7dnmP1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: AP_endonuc_2 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, C [auth P] | PF01261 | Xylose isomerase-like TIM barrel (AP_endonuc_2) | Xylose isomerase-like TIM barrel | This TIM alpha/beta barrel structure is found in xylose isomerase (Swiss:P19148) and in endonuclease IV (Swiss:P12638, EC:3.1.21.2). This domain is also found in the N termini of bacterial myo-inositol catabolism proteins. These are involved in the ... | Domain |
B, D [auth Q] | PF19906 | Domain of unknown function (DUF6379) (DUF6379) | Domain of unknown function (DUF6379) | This domain of unknown function is found in uncharacterised proteins from bacteria and eukaryotes. It is about 100 amino acids in length and contains a DG conserved motif. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A, C [auth P] | AP_endonuc_2 domain-containing protein | - | - | |
B, D [auth Q] | AgCarC2 | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, C [auth P] | IPR013022 | Xylose isomerase-like, TIM barrel domain | Domain |
A, C [auth P] | IPR036237 | Xylose isomerase-like superfamily | Homologous Superfamily |
B, D [auth Q] | IPR045959 | C-glycoside deglycosidase beta subunit | Domain |